RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 DCLK2Q8N568 766 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 BEND7Q8N7W2 519 aaPredicted RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 LKAAEAR1Q8TD35 194 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 BIRC8Q96P09 236 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 TMEM109Q9BVC6 243 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 FAM126AQ9BYI3 521 aaPredicted RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 ZCCHC2Q9C0B9 1178 aaKnown RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 DUSP15Q9H1R2 295 aaPredicted RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 PPCSQ9HAB8 311 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 SARS2Q9NP81 518 aaKnown RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 FAM8A1Q9UBU6 413 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 GNPTGQ9UJJ9 305 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 PRKAB1Q9Y478 270 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 GOLGA6L10A6NI86 522 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 RGS16O15492 202 aaPredicted RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 GALR2O43603 387 aaPredicted RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 KRT37O76014 449 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 KRT38O76015 456 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 MYZAPP0CAP1 466 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 ATP1B2P14415 290 aaPredicted RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 ZNF8P17098 575 aaPredicted RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 KRT15P19012 456 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 ITPKAP23677 461 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 TEAD1P28347 426 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 PBLDP30039 288 aaPredicted RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 NUDT1P36639 197 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 CTSCP53634 463 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 CDKN2DP55273 166 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 GTF2H3Q13889 308 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 ZNF460Q14592 562 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 HECTD2Q5U5R9 776 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 LYSMD4Q5XG99 296 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 PMS2CLQ68D20 193 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 KCTD16Q68DU8 428 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 KYAT3Q6YP21 454 aaKnown RBP19.14■□□□□ 0.65
USP39-218ENST00000493829 CMC1Q7Z7K0 106 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 TDRPQ86YL5 185 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 OLFM1Q99784 485 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 EURLQ9NYK6 297 aa19.14■□□□□ 0.65
USP39-218ENST00000493829 IQANK1A0A1B0GTG1 560 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 TMEM202A6NGA9 273 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 RHOBTB1O94844 696 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 CDK14O94921 469 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 PKMP14618 531 aaKnown RBP19.13■□□□□ 0.65
USP39-218ENST00000493829 THOP1P52888 689 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 PFN3P60673 137 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 NFATC4Q14934 902 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 LPAL2Q16609 132 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 ZNF528Q3MIS6 628 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 PRR23BQ6ZRT6 265 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 ABI3BPQ7Z7G0 1075 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 TRAPPC5Q8IUR0 188 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 SCG3Q8WXD2 468 aaKnown RBP19.13■□□□□ 0.65
USP39-218ENST00000493829 NELL1Q92832 810 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 GPR22Q99680 433 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 AARSD1Q9BTE6 412 aaKnown RBP19.13■□□□□ 0.65
USP39-218ENST00000493829 ACBD3Q9H3P7 528 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 TRIM39Q9HCM9 518 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 TM9SF3Q9HD45 589 aa19.13■□□□□ 0.65
USP39-218ENST00000493829 MRPL40Q9NQ50 206 aaKnown RBP19.13■□□□□ 0.65
USP39-218ENST00000493829 PCYT1BQ9Y5K3 369 aaPredicted RBP19.13■□□□□ 0.65
USP39-218ENST00000493829 E5RI56 91 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 TPP1O14773 563 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 TRIM16O95361 564 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 ESR1P03372 595 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 SNRPAP09012 282 aaKnown RBP19.12■□□□□ 0.65
USP39-218ENST00000493829 THEGLP0DJG4 465 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 GMPRP36959 345 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 USP10Q14694 798 aaKnown RBP19.12■□□□□ 0.65
USP39-218ENST00000493829 TCEA2Q15560 299 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 PLK5Q496M5 336 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 WDR45BQ5MNZ6 344 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 NAPRTQ6XQN6 538 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 SLC22A18ASQ8N1D0 253 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 RIBC1Q8N443 379 aaPredicted RBP19.12■□□□□ 0.65
USP39-218ENST00000493829 LGALS13Q9UHV8 139 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 TSR3Q9UJK0 312 aaKnown RBP19.12■□□□□ 0.65
USP39-218ENST00000493829 PCDHB1Q9Y5F3 818 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 HS3ST3A1Q9Y663 406 aa19.12■□□□□ 0.65
USP39-218ENST00000493829 GOLGA8RI6L899 631 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 PHGDHO43175 533 aaKnown RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 CHRM3P20309 590 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 RPS3P23396 243 aaKnown RBP eCLIP19.11■□□□□ 0.653e-13■■■■□ 26.3
USP39-218ENST00000493829 RABIFP47224 123 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 SLC12A2P55011 1212 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 TAS2R39P59534 338 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 KIAA1024LP59773 190 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 LGSNQ5TDP6 509 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 FAM45BPQ6NSW5 357 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 TMEM220Q6QAJ8 160 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 ENPP7Q6UWV6 458 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 C11orf74Q86VG3 221 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 CEP97Q8IW35 865 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 FAM45AQ8TCE6 357 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 PDXPQ96GD0 296 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 CAAP1Q9H8G2 361 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 FGF22Q9HCT0 170 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 GALPQ9UBC7 116 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 TNRC6BQ9UPQ9 1833 aaKnown RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 A0A1W2PPM1 405 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms