RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CUZD1Q86UP6 607 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 UNC5BQ8IZJ1 945 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OR8D1Q8WZ84 308 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 KAT8Q9H7Z6 458 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 LRTM1Q9HBL6 345 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FARSBQ9NSD9 589 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BLOC1S4Q9NUP1 217 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM39AQ9NV64 488 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ELOVL2Q9NXB9 296 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PCDHGB2Q9Y5G2 931 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FXYD6-FXYD2A0A087WZ82 144 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ELOVL7A1L3X0 281 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 HYKKA2RU49 373 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 H7C2Y5 167 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 DDX6P26196 483 aaKnown RBP eCLIP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 KIR3DL1P43629 444 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PSEN1P49768 467 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TPTEP56180 551 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CRADDP78560 199 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 XKR4Q5GH76 650 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 LPCAT4Q643R3 524 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 HAGHLQ6PII5 290 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ARSKQ6UWY0 536 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SSX6Q7RTT6 188 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 KCNK18Q7Z418 384 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SYNPOQ8N3V7 929 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ALLCQ8N6M5 410 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ASB12Q8WXK4 309 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SLC7A6OSQ96CW6 309 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NODALQ96S42 347 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM39BQ9GZU3 492 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 FXYD6Q9H0Q3 95 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ERVK-5Q9HDB9 667 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CHST7Q9NS84 486 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 DNAAF2Q9NVR5 837 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ALKBH4Q9NXW9 302 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF609O15014 1411 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NPEPPSL1A6NEC2 478 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 LACTBL1A8MY62 500 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TULP3O75386 442 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SLC25A14O95258 325 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 RASGRP1O95267 797 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ASGR1P07306 291 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PAX3P23760 479 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MC4RP32245 332 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GNPDA1P46926 289 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PGDP52209 483 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PPATQ06203 517 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GRM3Q14832 879 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PAQR7Q86WK9 346 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 DNAJB3Q8WWF6 145 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 COPS8Q99627 209 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GAL3ST1Q99999 423 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GPATCH1Q9BRR8 931 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SNX15Q9NRS6 342 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 IMP3Q9NV31 184 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TMLHEQ9NVH6 421 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NR2E1Q9Y466 385 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MRPL42Q9Y6G3 142 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SPARCP09486 303 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GBX2P52951 348 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 BRMS1LQ5PSV4 323 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NPNTQ6UXI9 565 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CEP97Q8IW35 865 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PHC2Q8IXK0 858 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CRYBG2Q8N1P7 616 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ZSCAN4Q8NAM6 433 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PHC3Q8NDX5 983 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PNPT1Q8TCS8 783 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CLPTM1LQ96KA5 538 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF570Q96NI8 536 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PLA2G12BQ9BX93 195 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ASAH2Q9NR71 780 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 HIF3AQ9Y2N7 669 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 A0A1W2PRQ8 180 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 DAPL1A0PJW8 107 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NARSO43776 548 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ATG13O75143 517 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 PRAMEF12O95522 483 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CSN2P05814 226 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 YES1P07947 543 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TACSTD2P09758 323 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ELFN1P0C7U0 828 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SLC2A2P11168 524 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MAGEA6P43360 314 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NRG1Q02297 640 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 NFIXQ14938 502 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 RAB39AQ14964 217 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 EML3Q32P44 896 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 C6orf52Q5T4I8 152 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms