RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 DNAJB5O75953 348 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 JCHAINP01591 159 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PDGFAP04085 211 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PIRTP0C851 137 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 GPR89BP0CG08 455 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 FGF5P12034 268 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 BRAFP15056 766 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
SAMM50-205ENST00000493621 CASP14P31944 242 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 DEKP35659 375 aaKnown RBP12.13□□□□□ -0.47
SAMM50-205ENST00000493621 CAPZBP47756 277 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 GBE1Q04446 702 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 TYRO3Q06418 890 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 GPR18Q14330 331 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 FAM182AQ5T1J6 154 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PRSS42Q7Z5A4 293 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 LRRTM4Q86VH4 590 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 CPNE8Q86YQ8 564 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 KLHL6Q8WZ60 621 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 GLYATL1Q969I3 302 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 ZNF670Q9BS34 389 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 ZSCAN5AQ9BUG6 496 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 TRIM10Q9UDY6 481 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PADI1Q9ULC6 663 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 SHOC2Q9UQ13 582 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PCDHGA6Q9Y5G7 932 aa12.13□□□□□ -0.47
SAMM50-205ENST00000493621 PRRC2CQ9Y520 2896 aaKnown RBP12.13□□□□□ -0.47
SAMM50-205ENST00000493621 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 OR52A4PA6NMU1 304 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 KCNK1O00180 336 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 VPS4BO75351 444 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 TIAF1O95411 115 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 MT-ND3P03897 115 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 CYP1A2P05177 515 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 MX2P20592 715 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 GNLYP22749 145 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
SAMM50-205ENST00000493621 DCDC1P59894 354 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 SLC10A2Q12908 348 aaPredicted RBP12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ANO6Q4KMQ2 910 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ABRAXAS1Q6UWZ7 409 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 TRAM1L1Q8N609 369 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 PQLC3Q8N755 202 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 HDAC11Q96DB2 347 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 CXorf40BQ96DE9 158 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
SAMM50-205ENST00000493621 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 TIMM29Q9BSF4 260 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
SAMM50-205ENST00000493621 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ACTL8Q9H568 366 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 PDE7BQ9NP56 450 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 SLC40A1Q9NP59 571 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 VPS4AQ9UN37 437 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 ZNF711Q9Y462 761 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
SAMM50-205ENST00000493621 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 A0A1B0GTH6 734 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 TTLL8A6PVC2 850 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 CDK14O94921 469 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 AGFG2O95081 481 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 RECKO95980 971 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 NELFEP18615 380 aaKnown RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 IDSP22304 550 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 PPP1CAP62136 330 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 TUBB3Q13509 450 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 SEMA5AQ13591 1074 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 PDK2Q15119 407 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 TMC3Q7Z5M5 1100 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 ZNF547Q8IVP9 402 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 MAP7D3Q8IWC1 876 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 CNTD1Q8N815 330 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 SIDT2Q8NBJ9 832 aaKnown RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 TRIB3Q96RU7 358 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 CEP41Q9BYV8 373 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 GPR63Q9BZJ6 419 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 RAD18Q9NS91 495 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 PLEKHB1Q9UF11 243 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-205ENST00000493621 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
SAMM50-205ENST00000493621 A0A087X0T9 212 aa12.1□□□□□ -0.47
SAMM50-205ENST00000493621 IGHV5-51A0A0C4DH38 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms