RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PGAP2Q9UHJ9 254 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 GMEB2Q9UKD1 530 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 COL5A2P05997 1499 aaPredicted RBP9.62□□□□□ -0.87
VPS8-225ENST00000492449 FNDC1Q4ZHG4 1894 aaPredicted RBP9.62□□□□□ -0.87
VPS8-225ENST00000492449 MATN4O95460 622 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 NR3C2P08235 984 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 CHMP24386 653 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 TGFBR1P36897 503 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 RGS7P49802 495 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 YWHAEP62258 255 aaKnown RBP9.62□□□□□ -0.87
VPS8-225ENST00000492449 KCNAB2Q13303 367 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 GALEQ14376 348 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 SPANXN2Q5MJ10 180 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 ZNF470Q6ECI4 717 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 PM20D1Q6GTS8 502 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 PLEKHM3Q6ZWE6 761 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 XYLT1Q86Y38 959 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 OR9I1Q8NGQ6 314 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 GPR22Q99680 433 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 OSBPL2Q9H1P3 480 aa9.62□□□□□ -0.87
VPS8-225ENST00000492449 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
VPS8-225ENST00000492449 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
VPS8-225ENST00000492449 G3V2T6 193 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PRMT5O14744 637 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 OR2B3O76000 313 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PAHP00439 452 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 HMGCRP04035 888 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 ADORA3P0DMS8 318 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 RAP2AP10114 183 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 POU3F3P20264 500 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 PSMB9P28065 219 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 GRM1Q13255 1194 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 NFE2L1Q14494 772 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 UGT3A2Q3SY77 523 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 LAMTOR1Q6IAA8 161 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TXNDC11Q6PKC3 985 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 STK32CQ86UX6 486 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TXNRD3Q86VQ6 643 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PAF1Q8N7H5 531 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TESCQ96BS2 214 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 SECISBP2Q96T21 854 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 FAM213AQ9BRX8 229 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 CAB39LQ9H9S4 337 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 SLC52A3Q9NQ40 469 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 ACSS2Q9NR19 701 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 ELF5Q9UKW6 265 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 PNMA8BQ9ULN7 279 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 WDR81Q562E7 1941 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 A0A0J9YYE9 177 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 OR6C70A6NIJ9 312 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PRPSAP2O60256 369 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 MAP3K6O95382 1288 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 ANGPTL1O95841 491 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 F9P00740 461 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 HMGN1P05114 100 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 FSHRP23945 695 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 HRH2P25021 359 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TIE1P35590 1138 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 ZNF143P52747 638 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 CRADDP78560 199 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 COX10Q12887 443 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TIGD7Q6NT04 549 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 BRAT1Q6PJG6 821 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 EFL1Q7Z2Z2 1120 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 GPAT4Q86UL3 456 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 FSTL5Q8N475 847 aaPredicted RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 KBTBD8Q8NFY9 601 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PDXPQ96GD0 296 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 ITPAQ9BY32 194 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 TMEM168Q9H0V1 697 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 EML4Q9HC35 981 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 TRMT13Q9NUP7 481 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 NUFIP1Q9UHK0 495 aaKnown RBP9.61□□□□□ -0.87
VPS8-225ENST00000492449 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
VPS8-225ENST00000492449 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 A0A0U1RQS6 177 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 AIREO43918 545 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 SLC22A5O76082 557 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 IFI30P13284 250 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 NPY2RP49146 381 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 CLK1P49759 484 aaKnown RBP9.6□□□□□ -0.87
VPS8-225ENST00000492449 CPT1AP50416 773 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 KCNC3Q14003 757 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 RFX4Q33E94 735 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 GLYATQ6IB77 296 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 B3GNT8Q7Z7M8 397 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 METTL3Q86U44 580 aaKnown RBP9.6□□□□□ -0.87
VPS8-225ENST00000492449 SETD9Q8NE22 299 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 PCDH19Q8TAB3 1148 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 NSUN6Q8TEA1 469 aaKnown RBP9.6□□□□□ -0.87
VPS8-225ENST00000492449 LPAR1Q92633 364 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 CIDECQ96AQ7 238 aaPredicted RBP9.6□□□□□ -0.87
VPS8-225ENST00000492449 REPS1Q96D71 796 aa9.6□□□□□ -0.87
VPS8-225ENST00000492449 FCRL3Q96P31 734 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms