RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 PATE1Q8WXA2 126 aa25.45■■□□□ 1.66
TTC3-223ENST00000492275 HDAC10Q969S8 669 aa25.45■■□□□ 1.66
TTC3-223ENST00000492275 ULK4Q96C45 1275 aa25.45■■□□□ 1.66
TTC3-223ENST00000492275 C16orf45Q96MC5 204 aaPredicted RBP25.45■■□□□ 1.66
TTC3-223ENST00000492275 TTC25Q96NG3 672 aa25.45■■□□□ 1.66
TTC3-223ENST00000492275 IL22Q9GZX6 179 aa25.45■■□□□ 1.66
TTC3-223ENST00000492275 ZNF7P17097 686 aaPredicted RBP25.44■■□□□ 1.66
TTC3-223ENST00000492275 CLDN6P56747 220 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 SHC2P98077 582 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 E2F1Q01094 437 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 GTF2H3Q13889 308 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 HLTFQ14527 1009 aaKnown RBP eCLIP25.44■■□□□ 1.661e-7■■□□□ 11.6
TTC3-223ENST00000492275 SMAD1Q15797 465 aaKnown RBP25.44■■□□□ 1.66
TTC3-223ENST00000492275 PLA2G4EQ3MJ16 856 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 C14orf28Q4W4Y0 310 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 NLRP9Q7RTR0 991 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 PIANPQ8IYJ0 282 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 NAT14Q8WUY8 206 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 SCNM1Q9BWG6 230 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 ZCCHC2Q9C0B9 1178 aaKnown RBP25.44■■□□□ 1.66
TTC3-223ENST00000492275 KLC4Q9NSK0 619 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 SYBUQ9NX95 663 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 TBC1D29Q9UFV1 150 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 PIKFYVEQ9Y2I7 2098 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 KNTC1P50748 2209 aa25.44■■□□□ 1.66
TTC3-223ENST00000492275 NCOR2Q9Y618 2525 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 PRR19A6NJB7 356 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 MSH3P20585 1137 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 IVDP26440 423 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 AKT1P31749 480 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 FOXN2P32314 431 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 CLCNKAP51800 687 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 MAZP56270 477 aaKnown RBP25.43■■□□□ 1.66
TTC3-223ENST00000492275 SARNPP82979 210 aaKnown RBP25.43■■□□□ 1.66
TTC3-223ENST00000492275 INSM1Q01101 510 aaPredicted RBP25.43■■□□□ 1.66
TTC3-223ENST00000492275 CACNG1Q06432 222 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 RNASEH2BQ5TBB1 312 aaKnown RBP25.43■■□□□ 1.66
TTC3-223ENST00000492275 TMEM220Q6QAJ8 160 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 TMPRSS7Q7RTY8 843 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 TRAPPC5Q8IUR0 188 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 PEX13Q92968 403 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 NAT6Q93015 286 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 SGF29Q96ES7 293 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 RUNDC3BQ96NL0 473 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 ASIC3Q9UHC3 531 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 RABGEF1Q9UJ41 708 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 KLK13Q9UKR3 277 aa25.43■■□□□ 1.66
TTC3-223ENST00000492275 BPTFQ12830 3046 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 OR2AG2A6NM03 316 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 GOLGA8MH3BSY2 632 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 CASC3O15234 703 aaKnown RBP25.42■■□□□ 1.66
TTC3-223ENST00000492275 SGTAO43765 313 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 OPA1O60313 960 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 DR1Q01658 176 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 SYDE1Q6ZW31 735 aaPredicted RBP25.42■■□□□ 1.66
TTC3-223ENST00000492275 DET1Q7L5Y6 550 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 TAS2R42Q7RTR8 314 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 SERPINA9Q86WD7 417 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 PPIL6Q8IXY8 311 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 MPP5Q8N3R9 675 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 ARL14Q8N4G2 192 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 CCDC74AQ96AQ1 378 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 TIMM29Q9BSF4 260 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 KIFC1Q9BW19 673 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 TREX1Q9NSU2 369 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 ZDHHC3Q9NYG2 299 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 RNF215Q9Y6U7 377 aa25.42■■□□□ 1.66
TTC3-223ENST00000492275 COL27A1Q8IZC6 1860 aaPredicted RBP25.42■■□□□ 1.66
TTC3-223ENST00000492275 UNC13CQ8NB66 2214 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 IGLV3-16A0A075B6K0 115 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 FAM221BA6H8Z2 402 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 A6NCN8 305 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 POP7O75817 140 aaKnown RBP25.41■■□□□ 1.66
TTC3-223ENST00000492275 GOT2P00505 430 aaKnown RBP25.41■■□□□ 1.66
TTC3-223ENST00000492275 MLNP12872 115 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 ACRV1P26436 265 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 NMBRP28336 390 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 INSCQ1MX18 579 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 MARCH9Q86YJ5 346 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 JAMLQ86YT9 394 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 SPATA4Q8NEY3 305 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 SERPINB12Q96P63 405 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 KRT12Q99456 494 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 COPS8Q99627 209 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 ANGPTL2Q9UKU9 493 aa25.41■■□□□ 1.66
TTC3-223ENST00000492275 TRBV23OR9-2A0A075B6M9 112 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 DNALI1O14645 258 aaPredicted RBP25.4■■□□□ 1.66
TTC3-223ENST00000492275 TTI1O43156 1089 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 SNX2O60749 519 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 GLB1P16278 677 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 DBN1Q16643 649 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 FNBP1LQ5T0N5 605 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 IYDQ6PHW0 289 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 BEND7Q8N7W2 519 aaPredicted RBP25.4■■□□□ 1.66
TTC3-223ENST00000492275 OR6C4Q8NGE1 309 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 MAPK15Q8TD08 544 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 TRIM44Q96DX7 344 aaPredicted RBP25.4■■□□□ 1.66
TTC3-223ENST00000492275 DCUN1D1Q96GG9 259 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 SGSM3Q96HU1 749 aa25.4■■□□□ 1.66
TTC3-223ENST00000492275 CCDC3Q9BQI4 270 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms