RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MEP1AQ16819 746 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 ZDHHC20Q5W0Z9 365 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 ZNF324BQ6AW86 544 aaPredicted RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PM20D2Q8IYS1 436 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 DCP1BQ8IZD4 617 aaKnown RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 SLC5A8Q8N695 610 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 CCDC89Q8N998 374 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 MCUQ8NE86 351 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 APPL2Q8NEU8 664 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 OR5R1Q8NH85 324 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 SPATA22Q8NHS9 363 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 SLC20A1Q8WUM9 679 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 SLC44A1Q8WWI5 657 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 ABTB1Q969K4 478 aaPredicted RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 CDCA5Q96FF9 252 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 DUX5Q96PT3 197 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PCYT2Q99447 389 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PAFAH2Q99487 392 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 KIFC3Q9BVG8 833 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 UBTD1Q9HAC8 227 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PDE7BQ9NP56 450 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 GIMAP4Q9NUV9 329 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PSD3Q9NYI0 1048 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 A0A1W2PR77 199 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 OR2A25A4D2G3 310 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 LILRA5A6NI73 299 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 SLC16A5O15375 505 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 AVILO75366 819 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 RSL1D1O76021 490 aaKnown RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 SELLP14151 372 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 MYOD1P15172 320 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 KCNA5P22460 613 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 MATR3P43243 847 aaKnown RBP eCLIP3.81□□□□□ -1.8
VTA1-204ENST00000491881 MMP14P50281 582 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 SUOXP51687 545 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PNLIPRP2P54317 469 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PSMC6P62333 389 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 TMF1P82094 1093 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PPP2R2BQ00005 443 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 NUCB1Q02818 461 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 CALD1Q05682 793 aaKnown RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 SLC20A2Q08357 652 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 ZNF234Q14588 700 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 DLG2Q15700 870 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 SYT16Q17RD7 645 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 C9orf57Q5W0N0 161 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 UNQ6126/PRO20091Q6UXV3 157 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 TPRG1Q6ZUI0 275 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 ARMC9Q7Z3E5 817 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 KBTBD6Q86V97 674 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 C1orf87Q8N0U7 546 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 IL17RCQ8NAC3 791 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 BBS10Q8TAM1 723 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 SECTM1Q8WVN6 248 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PRPF31Q8WWY3 499 aaKnown RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 IL17FQ96PD4 163 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 HGH1Q9BTY7 390 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 RTN4RQ9BZR6 473 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 TAS2R14Q9NYV8 317 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 CPSF2Q9P2I0 782 aaKnown RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 DNAJB4Q9UDY4 337 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 POU2F3Q9UKI9 436 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PLAGL1Q9UM63 463 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 B3GALT5Q9Y2C3 310 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 TMEM184BQ9Y519 407 aaPredicted RBP3.81□□□□□ -1.8
VTA1-204ENST00000491881 PCDHGA5Q9Y5G8 931 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 PCDHAC2Q9Y5I4 1007 aa3.81□□□□□ -1.8
VTA1-204ENST00000491881 ARHGEF40Q8TER5 1519 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 LOC100509620A0A075B734 347 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 IGHV4OR15-8A0A075B7B6 117 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 LNP1A1A4G5 178 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 TMEM8BA6NDV4 472 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 C4orf47A7E2U8 309 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 TMEM189-UBE2V1I3L0A0 370 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 PAPSS1O43252 624 aaPredicted RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 CAMTA2O94983 1202 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 PPP1R3DO95685 299 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 VPREB1P12018 145 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 AKR1B1P15121 316 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ITGA2P17301 1181 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 NR2F2P24468 414 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 HRH2P25021 359 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 RAD52P43351 418 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ARSEP51690 589 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 CTSCP53634 463 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 BRWD1-AS2P59051 145 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ISL1P61371 349 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 EEF1A1P68104 462 aaKnown RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 SPOCK1Q08629 439 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ZBTB17Q13105 803 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 UBE2V1Q13404 147 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 PCLAFQ15004 111 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 C15orf59Q2T9L4 293 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms