RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FOXQ1Q9C009 403 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 TRIM4Q9C037 500 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 VPS45Q9NRW7 570 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 VTI1BQ9UEU0 232 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 FBXL21Q9UKT6 434 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 SARDHQ9UL12 918 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 RAI2Q9Y5P3 530 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 SLCO1B7G3V0H7 640 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 PSMD3O43242 534 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 EPHA3P29320 983 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 CSNK1DP48730 415 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 GEMP55040 296 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 FZD5Q13467 585 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 PTPRRQ15256 657 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 MMEL1Q495T6 779 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 KIAA1211LQ6NV74 962 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 RANBP10Q6VN20 620 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 STK40Q8N2I9 435 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 ICA1LQ8NDH6 482 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 STON2Q8WXE9 905 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 MOCOSQ96EN8 888 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 PPP1R36Q96LQ0 422 aa22.58■■□□□ 1.2
USF3-203ENST00000491165 C6orf203Q9P0P8 240 aaPredicted RBP22.58■■□□□ 1.2
USF3-203ENST00000491165 PHGDHO43175 533 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 SBK3P0C264 359 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 CHRNB1P11230 501 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 PPARGP37231 505 aaPredicted RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 AP1S1P61966 158 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 GALNT3Q14435 633 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 GRAMD1BQ3KR37 738 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 ZNF852Q6ZMS4 543 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 CPSF7Q8N684 471 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 TXNDC5Q8NBS9 432 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 RPLP0P6Q8NHW5 317 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 PDCD6IPQ8WUM4 868 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 BTBD9Q96Q07 612 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 FSD1LQ9BXM9 530 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 PRSS16Q9NQE7 514 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 PSMD13Q9UNM6 376 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 RUVBL2Q9Y230 463 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 GRID2O43424 1007 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 LEFTY1O75610 366 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 ATXN1LP0C7T5 689 aaKnown RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 SLC35E2BP0CK96 405 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 TFEBP19484 476 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 ADSLP30566 484 aaPredicted RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 CCR10P46092 362 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 GLRBP48167 497 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 NAGLUP54802 743 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 PRKCQQ04759 706 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 DLG1Q12959 904 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 CYLC2Q14093 348 aaPredicted RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 LIN52Q52LA3 116 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 OGFRL1Q5TC84 451 aaPredicted RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 BNC2Q6ZN30 1099 aaPredicted RBP22.57■■□□□ 1.2
USF3-203ENST00000491165 PLPP6Q8IY26 295 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 DSELQ8IZU8 1212 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 STYXQ8WUJ0 223 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 TBL1YQ9BQ87 522 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 NUF2Q9BZD4 464 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 ACSS2Q9NR19 701 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 CDYLQ9Y232 598 aa22.57■■□□□ 1.2
USF3-203ENST00000491165 EDDM13A0A1B0GTR0 161 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 LOC285095A0A1B0GVY8 99 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 CCDC78A2IDD5 438 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 COL6A2P12110 1019 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 CD1EP15812 388 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 STARD6P59095 220 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 UGP2Q16851 508 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 C11orf91Q3C1V1 193 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 POM121L1PQ3SYA9 428 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 PQLC1Q8N2U9 271 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 KCTD4Q8WVF5 259 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 FAM129BQ96TA1 746 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 ZDHHC2Q9UIJ5 367 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 SLC8A2Q9UPR5 921 aa22.56■■□□□ 1.2
USF3-203ENST00000491165 MAN2B1O00754 1011 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 FZD6O60353 706 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 KLF8O95600 359 aaPredicted RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 POP4O95707 220 aaKnown RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 UGT2B4P06133 528 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 ARSIQ5FYB1 569 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 LRRC8EQ6NSJ5 796 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 UBALD2Q8IYN6 164 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 FSTL5Q8N475 847 aaPredicted RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 PIP4K2CQ8TBX8 421 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 ZNF385DQ9H6B1 395 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 G3BP2Q9UN86 482 aaKnown RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 DTNAQ9Y4J8 743 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 PCDHB9Q9Y5E1 797 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 DNAH14Q0VDD8 3507 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 TTC28Q96AY4 2481 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 COL9A1P20849 921 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 CES1P23141 567 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 NTSR1P30989 418 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 PDK3Q15120 406 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 PCID2Q5JVF3 399 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 SIRPB2Q5JXA9 342 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 SLC41A1Q8IVJ1 513 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms