RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ENPP7Q6UWV6 458 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 LRIG3Q6UXM1 1119 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 MACC1Q6ZN28 852 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 GCNT7Q6ZNI0 430 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 ABI3BPQ7Z7G0 1075 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 GALNT13Q8IUC8 556 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 TRAPPC5Q8IUR0 188 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 SYT12Q8IV01 421 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 SLC41A1Q8IVJ1 513 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 DENND6AQ8IWF6 608 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 PIANPQ8IYJ0 282 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 UNC5BQ8IZJ1 945 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 OXR1Q8N573 874 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 OR56A4Q8NGH8 313 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 FAM45AQ8TCE6 357 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 PIGKQ92643 395 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 MTBPQ96DY7 904 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 AGAP2Q99490 1192 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 OR2AG1Q9H205 316 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 RHOJQ9H4E5 214 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 TM9SF3Q9HD45 589 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 MARCH4Q9P2E8 410 aaPredicted RBP10.83□□□□□ -0.68
VARS2-210ENST00000490699 ZNF180Q9UJW8 692 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 CRYL1Q9Y2S2 319 aa10.83□□□□□ -0.68
VARS2-210ENST00000490699 TLDC2A0PJX2 215 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 POM121BA6NF01 834 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 TLR4O00206 839 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 TNFRSF10CO14798 259 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 GPR39O43194 453 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 LILRB5O75023 590 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 RASGRP1O95267 797 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 CFIP05156 583 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 PKMP14618 531 aaKnown RBP10.82□□□□□ -0.68
VARS2-210ENST00000490699 RPS3P23396 243 aaKnown RBP eCLIP10.82□□□□□ -0.68
VARS2-210ENST00000490699 ITPKAP23677 461 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 MAOBP27338 520 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 FMO4P31512 558 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 POLD2P49005 469 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 CDKN1CP49918 316 aaPredicted RBP10.82□□□□□ -0.68
VARS2-210ENST00000490699 MPP1Q00013 466 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 GPS2Q13227 327 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 CASP8Q14790 479 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 TTLL9Q3SXZ7 439 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 KRT71Q3SY84 523 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 SYTL3Q4VX76 610 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 DET1Q7L5Y6 550 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 LDB1Q86U70 411 aaPredicted RBP10.82□□□□□ -0.68
VARS2-210ENST00000490699 TRIM74Q86UV6 250 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 LRRTM4Q86VH4 590 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 PARGQ86W56 976 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 OR13H1Q8NG92 308 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 SLC44A1Q8WWI5 657 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 FUBP1Q96AE4 644 aaKnown RBP10.82□□□□□ -0.68
VARS2-210ENST00000490699 ATXN7L3BQ96GX2 97 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 COX14Q96I36 57 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 ELMO2Q96JJ3 720 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 TSNARE1Q96NA8 513 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 RBBP8Q99708 897 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 SLC13A1Q9BZW2 595 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 TAS2R13Q9NYV9 303 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 ZNHIT2Q9UHR6 403 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 GMEB2Q9UKD1 530 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 GPR34Q9UPC5 381 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 HCN4Q9Y3Q4 1203 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 PCDHGA5Q9Y5G8 931 aa10.82□□□□□ -0.68
VARS2-210ENST00000490699 IGLV3-16A0A075B6K0 115 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 FAM95CA0A1B0GW59 222 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 PRSS38A1L453 326 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 H0Y8X5 98 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 VILLO15195 856 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 KMOO15229 486 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 KCNJ13O60928 360 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 S1PR4O95977 384 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 SOD1P00441 154 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 TNFP01375 233 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 AHSGP02765 367 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 APOA4P06727 396 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 SYPP08247 313 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 PRSS56P0CW18 603 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 CTSEP14091 401 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 KRT15P19012 456 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 CHRM3P20309 590 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 SAT1P21673 171 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 SKIV2L2P42285 1042 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 SERPINB8P50452 374 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 LIMK2P53671 638 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 PPARDQ03181 441 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 EFTUD2Q15029 972 aaKnown RBP eCLIP10.81□□□□□ -0.685e-6■■□□□ 12
VARS2-210ENST00000490699 DUOXA1Q1HG43 343 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 INSCQ1MX18 579 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 TAF1BQ53T94 588 aaPredicted RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 CEP85LQ5SZL2 805 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 LAIR1Q6GTX8 287 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 TMEM220Q6QAJ8 160 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms