RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SKA1Q96BD8 255 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
CCDC39-206ENST00000489868 PLK3Q9H4B4 646 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 KAT14Q9H8E8 782 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 PAG1Q9NWQ8 432 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 MDFICQ9P1T7 246 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 MARCH4Q9P2E8 410 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-206ENST00000489868 MTMR6Q9Y217 621 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 A0A1W2PR77 199 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 PRR23AA6NEV1 266 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 OGG1O15527 345 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 FGF17O60258 216 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 ZNF217O75362 1048 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 MSH2P43246 934 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 CAMPP49913 170 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 TFAP4Q01664 338 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SIM2Q14190 667 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-206ENST00000489868 ACCSLQ4AC99 568 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 GFI1BQ5VTD9 330 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SARM1Q6SZW1 724 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 PLXDC2Q6UX71 529 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SLC26A9Q7LBE3 791 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 CCDC190Q86UF4 302 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 EMC1Q8N766 993 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 PPHLN1Q8NEY8 458 aaKnown RBP4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 NR4A3Q92570 626 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 EPYCQ99645 322 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SEMA3CQ99985 751 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 CHCHD6Q9BRQ6 235 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 FTOQ9C0B1 505 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC39-206ENST00000489868 SH2D4AQ9H788 454 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 TCP11L1Q9NUJ3 509 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 FBXL17Q9UF56 701 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 TSPYL4Q9UJ04 414 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 FAF1Q9UNN5 650 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-206ENST00000489868 LYVE1Q9Y5Y7 322 aa4.94□□□□□ -1.62
CCDC39-206ENST00000489868 MYO1GB0I1T2 1018 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 IGHV4-39P01824 125 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 FGF5P12034 268 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 TCEA1P23193 301 aaKnown RBP4.93□□□□□ -1.62
CCDC39-206ENST00000489868 AHRP35869 848 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 CDH8P55286 799 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 IKQ13123 557 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-206ENST00000489868 ZSCAN23Q3MJ62 389 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 CHST9Q7L1S5 443 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 PIWIL4Q7Z3Z4 852 aaKnown RBP4.93□□□□□ -1.62
CCDC39-206ENST00000489868 TTC39CQ8N584 583 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 SLC5A8Q8N695 610 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 SCFD2Q8WU76 684 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 DNAAF4Q8WXU2 420 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 FKRPQ9H9S5 495 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 ZNF334Q9HCZ1 680 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-206ENST00000489868 POLG2Q9UHN1 485 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 SESN1Q9Y6P5 492 aa4.93□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM8BA6NDV4 472 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 DVL1O14640 695 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 SYNGR3O43761 229 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 CTSVO60911 334 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 TPPPO94811 219 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 HIST1H2ABP04908 130 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 CFC1P0CG37 223 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 HIST1H2ADP20671 130 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 MMP14P50281 582 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 DVL1P1P54792 670 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-206ENST00000489868 PHEXP78562 749 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 IRF3Q14653 427 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 MVPQ14764 893 aaKnown RBP4.92□□□□□ -1.62
CCDC39-206ENST00000489868 RARS2Q5T160 578 aaKnown RBP4.92□□□□□ -1.62
CCDC39-206ENST00000489868 PDSS1Q5T2R2 415 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 HIST3H2AQ7L7L0 130 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 EPHX4Q8IUS5 362 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 GCSAMQ8N6F7 178 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 KLHDC9Q8NEP7 349 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 POMGNT1Q8WZA1 660 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 OXNAD1Q96HP4 312 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-206ENST00000489868 HES6Q96HZ4 224 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM39BQ9GZU3 492 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 MBNL1Q9NR56 388 aaKnown RBP4.92□□□□□ -1.62
CCDC39-206ENST00000489868 OGFRQ9NZT2 677 aa4.92□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM189-UBE2V1I3L0A0 370 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 J3QR06 171 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 HS6ST1O60243 411 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 DOK2O60496 412 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 BAG4O95429 457 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 SRPRAP08240 638 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 CLTBP09497 229 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM11P17152 192 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 DCTP40126 519 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 GEMIN4P57678 1058 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 CD81P60033 236 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 PRAMEP78395 509 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 LRMPQ12912 555 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 DMP1Q13316 513 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 UBE2V1Q13404 147 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM154Q6P9G4 183 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 ZNF449Q6P9G9 518 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 ANO5Q75V66 913 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms