RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ZNF658Q5TYW1 1059 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 TRIM65Q6PJ69 517 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 TRIM59Q8IWR1 403 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 UMODL1-AS1Q8N2C9 162 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 LZTR1Q8N653 840 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 RELTQ969Z4 430 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 SGSM3Q96HU1 749 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 COX14Q96I36 57 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 SLC41A2Q96JW4 573 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 FCRL4Q96PJ5 515 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 MLPHQ9BV36 600 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 ABCG8Q9H221 673 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 UCK1Q9HA47 277 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 WASH6PQ9NQA3 447 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 CACNA1CQ13936 2221 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 MASP2O00187 686 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CPNE3O75131 537 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 PALMO75781 387 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 F13A1P00488 732 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 ALPPP05187 535 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 SLC2A4P14672 509 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 SLC9A1P19634 815 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CAPN3P20807 821 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CDH5P33151 784 aaPredicted RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CAPZBP47756 277 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 SCNN1BP51168 640 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 PAK1Q13153 545 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 MYBPC3Q14896 1274 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 SMTNL2Q2TAL5 461 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 PRAMEF17Q5VTA0 474 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 IRGCQ6NXR0 463 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 DUS1LQ6P1R4 473 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 MRGPRGQ86SM5 289 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 ZADH2Q8N4Q0 377 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 SIDT2Q8NBJ9 832 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 TMEM35BQ8NCS4 154 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 GPT2Q8TD30 523 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 FAR1Q8WVX9 515 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 AP2M1Q96CW1 435 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF837Q96EG3 531 aaPredicted RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CELF6Q96J87 481 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 TRAPPC9Q96Q05 1148 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 GOLPH3LQ9H4A5 285 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 LRRC19Q9H756 370 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 METTL5Q9NRN9 209 aaKnown RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 FGF21Q9NSA1 209 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF624Q9P2J8 865 aaPredicted RBP9.01□□□□□ -0.97
SSBP1-212ENST00000489378 CFAP45Q9UL16 551 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
SSBP1-212ENST00000489378 JMJD1CQ15652 2540 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 OR5K4A6NMS3 321 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 C19orf84I3L1E1 186 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 PSMD11O00231 422 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 KCNN4O15554 427 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 HTRA2O43464 458 aaPredicted RBP9□□□□□ -0.97
SSBP1-212ENST00000489378 SCRG1O75711 98 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CPP00450 1065 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CAPN1P07384 714 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 RAB40ALP0C0E4 278 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CD99P14209 185 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 DRD2P14416 443 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CD1EP15812 388 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 GPC1P35052 558 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 PAPOLAP51003 745 aaKnown RBP9□□□□□ -0.97
SSBP1-212ENST00000489378 AP1S1P61966 158 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 DBN1Q16643 649 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 PLEKHS1Q5SXH7 462 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 ATL3Q6DD88 541 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CYB5D1Q6P9G0 228 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 FAM198BQ6UWH4 519 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 SPOCD1Q6ZMY3 1216 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 ARCQ7LC44 396 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 TMEM126BQ8IUX1 230 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 AVL9Q8NBF6 648 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 JOSD2Q8TAC2 188 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
SSBP1-212ENST00000489378 SMIM14Q96QK8 99 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 SLX1AQ9BQ83 275 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 CINPQ9BW66 212 aaPredicted RBP9□□□□□ -0.97
SSBP1-212ENST00000489378 NLNQ9BYT8 704 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 SEMA5BQ9P283 1151 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
SSBP1-212ENST00000489378 SIK3Q9Y2K2 1263 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 DOCK10Q96BY6 2186 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 ABCA4P78363 2273 aa9□□□□□ -0.97
SSBP1-212ENST00000489378 MEN1O00255 615 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 FOXN3O00409 490 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CREB3O43889 395 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF202O95125 648 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 VIPP01282 170 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 KLK3P07288 261 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CYP2A6P11509 494 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CTPS1P17812 591 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms