RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SLC9B1Q4ZJI4 515 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MPPE1Q53F39 396 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PRSS36Q5K4E3 855 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PPM1LQ5SGD2 360 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF678Q5SXM1 525 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 C1orf146Q5VVC0 180 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CES5AQ6NT32 575 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ZFP1Q6P2D0 407 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 HACD2Q6Y1H2 254 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ATG14Q6ZNE5 492 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RIPOR1Q6ZS17 1223 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ADHFE1Q8IWW8 467 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CLYBLQ8N0X4 340 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PGAM4Q8N0Y7 254 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CCNYL1Q8N7R7 359 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 KYQ8NBH2 561 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RIN3Q8TB24 985 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 TSPEARQ8WU66 669 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MRPS31Q92665 395 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 DLG3Q92796 817 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ISG20Q96AZ6 181 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 TMA16Q96EY4 203 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 GCNAQ96QF7 691 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 TUBGCP5Q96RT8 1024 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 NDNQ99608 321 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 FEM1AQ9BSK4 669 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 NUSAP1Q9BXS6 441 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RNF38Q9H0F5 515 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 GSTO2Q9H4Y5 243 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 YY1AP1Q9H869 796 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MARCH4Q9P2E8 410 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 KLHL42Q9P2K6 505 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ZDHHC2Q9UIJ5 367 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PKP3Q9Y446 797 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 DYRK1BQ9Y463 629 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ARL5AQ9Y689 179 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 NUP210Q8TEM1 1887 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF106Q9H2Y7 1883 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 E2F8A0AVK6 867 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 E9PBE3 544 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 SDHDO14521 159 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 AURKAO14965 403 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 STX7O15400 261 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZBTB14O43829 449 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 GREM1O60565 184 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 KLHL41O60662 606 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 MLYCDO95822 493 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 PKMP14618 531 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 PTPN2P17706 415 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 HDCP19113 662 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ITGAXP20702 1163 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 RPS3P23396 243 aaKnown RBP eCLIP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 PIK3R1P27986 724 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 RHOAP61586 193 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 CACNG1Q06432 222 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TBL3Q12788 808 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 GALNT3Q14435 633 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF460Q14592 562 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 SMAD1Q15797 465 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF789Q5FWF6 425 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 COQ5Q5HYK3 327 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 GPR158Q5T848 1215 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ARMC12Q5T9G4 340 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 VWA5B1Q5TIE3 1220 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZDHHC20Q5W0Z9 365 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF549Q6P9A3 640 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TTC23LQ6PF05 361 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LRRC74BQ6ZQY2 392 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TMEM150AQ86TG1 271 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 CUZD1Q86UP6 607 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TMC8Q8IU68 726 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ELMOD1Q8N336 334 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 CBARPQ8N350 705 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LEMD2Q8NC56 503 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 OR4K2Q8NGD2 314 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 OR52K2Q8NGK3 314 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 FIBINQ8TAL6 211 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 MAPK15Q8TD08 544 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ZDHHC1Q8WTX9 485 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 WDR60Q8WVS4 1066 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 DNAJC9Q8WXX5 260 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 SMG7Q92540 1137 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ALG14Q96F25 216 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 NAF1Q96HR8 494 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LENG8Q96PV6 779 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 PANX3Q96QZ0 392 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 OR52B2Q96RD2 323 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LYSMD1Q96S90 227 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 ATOH8Q96SQ7 321 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 NUF2Q9BZD4 464 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 KIAA1522Q9P206 1035 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LHX3Q9UBR4 397 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 NKX1-2Q9UD57 310 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 APPL1Q9UKG1 709 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms