RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TRIM13O60858 407 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF189O75820 626 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 AP2A1O95782 977 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 CHRNA4P43681 627 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 STT3AP46977 705 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 CLCN2P51788 898 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 RFTN1Q14699 578 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 IER5LQ5T953 404 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 GRTP1Q5TC63 336 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 KCTD11Q693B1 232 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 FSTL4Q6MZW2 842 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 STRA8Q7Z7C7 330 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 MAFAQ8NHW3 353 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 FSD1LQ9BXM9 530 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ILKAPQ9H0C8 392 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 LHX3Q9UBR4 397 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 INSIG1O15503 277 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF821O75541 412 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 HNRNPCP07910 306 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■□□□ 11.7
CHD1L-208ENST00000488864 TPH1P17752 444 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 HSPA13P48723 471 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 WNT3AP56704 352 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 NAB1Q13506 487 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 RYBPQ8N488 228 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 CSGALNACT1Q8TDX6 532 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 RBBP8Q99708 897 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 CPNE1Q99829 537 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 FICDQ9BVA6 458 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 HEBP1Q9NRV9 189 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 TDRKHQ9Y2W6 561 aaKnown RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 AAR2Q9Y312 384 aaKnown RBP13.2□□□□□ -0.3
CHD1L-208ENST00000488864 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 BPTFQ12830 3046 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 PLOD2O00469 737 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ANXA9O76027 345 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF23P17027 643 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ALDH3B2P48448 385 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 NXNQ6DKJ4 435 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 TXNDC11Q6PKC3 985 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 Q6ZVU0 165 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ERI1Q8IV48 349 aaKnown RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 CPSF7Q8N684 471 aaKnown RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 TERB1Q8NA31 727 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 EME1Q96AY2 570 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 EVLQ9UI08 416 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ZDHHC2Q9UIJ5 367 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ERVW-1Q9UQF0 538 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 HS3ST2Q9Y278 367 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 SLC27A6Q9Y2P4 619 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 COL4A3Q01955 1670 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 TTC34A8MYJ7 566 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 HDAC3O15379 428 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 PIGNO95427 931 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 CR2P20023 1033 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 RPL10P27635 214 aaKnown RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 PPARGP37231 505 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 RPL14P50914 215 aaKnown RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 GEMP55040 296 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ART3Q13508 389 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ADRM1Q16186 407 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 PTPRNQ16849 979 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-208ENST00000488864 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ZNF554Q86TJ5 538 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 DLG3Q92796 817 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 ISL2Q96A47 359 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 SLC29A1Q99808 456 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 CAAP1Q9H8G2 361 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 NMRAL1Q9HBL8 299 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 OXSMQ9NWU1 459 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 THEGQ9P2T0 379 aa13.19□□□□□ -0.3
CHD1L-208ENST00000488864 TICRRQ7Z2Z1 1910 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 KAT7O95251 611 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 VAPBO95292 243 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 C2P06681 752 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 POLBP06746 335 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 SERPINF2P08697 491 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 TFEBP19484 476 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 GRIA4P48058 902 aa13.18□□□□□ -0.3
CHD1L-208ENST00000488864 LIMK2P53671 638 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms