RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 ZNF366Q8N895 744 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 GPR26Q8NDV2 337 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 DTX3LQ8TDB6 740 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 MYCBPQ99417 103 aaPredicted RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 TRIM55Q9BYV6 548 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 CDH19Q9H159 772 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 PCDH12Q9NPG4 1184 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 OXSMQ9NWU1 459 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 NFKBIL1Q9UBC1 381 aaPredicted RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 CRLS1Q9UJA2 301 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 OAS3Q9Y6K5 1087 aaKnown RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 RGSL1A5PLK6 1076 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 C16orf96A6NNT2 1141 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 A8MX80 341 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 TMEM114B3SHH9 223 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 H3BMM5 538 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 NPC1O15118 1278 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SBK3P0C264 359 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ITGB7P26010 798 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ACRV1P26436 265 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SKIV2L2P42285 1042 aaKnown RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 DCDC1P59894 354 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CHRNA6Q15825 494 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CTSL3PQ5NE16 218 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 LIPMQ5VYY2 423 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CES4AQ5XG92 561 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ERAP2Q6P179 960 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 TMEM207Q6UWW9 146 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ZCCHC23Q6ZST2 131 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 DSG4Q86SJ6 1040 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CRLF3Q8IUI8 442 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 RAVER1Q8IY67 606 aaKnown RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 NXPE1Q8N323 547 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ANKRD49Q8WVL7 239 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 ULK4Q96C45 1275 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CCDC126Q96EE4 140 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 PPP1R16AQ96I34 528 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CLPBQ9H078 707 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SUN2Q9UH99 717 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 MED16Q9Y2X0 877 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 PLXNB3Q9ULL4 1909 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 CCDC189A1A4V9 331 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 KPNA3O00505 521 aaPredicted RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 OR1I1O60431 355 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 HLA-EP13747 358 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.39
NELFE-209ENST00000488426 DRD1P21728 446 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 MMP12P39900 470 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SLC1A6P48664 564 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SEC13P55735 322 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 C2orf27AQ580R0 203 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 PARS2Q7L3T8 475 aaKnown RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 SYNPOQ8N3V7 929 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 NPHS2Q9NP85 383 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 TRMT6Q9UJA5 497 aaKnown RBP12.59□□□□□ -0.39
NELFE-209ENST00000488426 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
NELFE-209ENST00000488426 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 F8W8V4 182 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 PSMD11O00231 422 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 GPR39O43194 453 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 TFEBP19484 476 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 TGM1P22735 817 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 ATP5F1P24539 256 aaPredicted RBP12.58□□□□□ -0.4
NELFE-209ENST00000488426 IL12RB1P42701 662 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 TNFRSF4P43489 277 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 DNAJB13P59910 316 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
NELFE-209ENST00000488426 ATP6V0D1P61421 351 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 SEMG2Q02383 582 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 OVGP1Q12889 678 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 RALGDSQ12967 914 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 IFT88Q13099 833 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 ENPP2Q13822 863 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.4
NELFE-209ENST00000488426 LRRC73Q5JTD7 316 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 NKAPQ8N5F7 415 aaKnown RBP12.58□□□□□ -0.4
NELFE-209ENST00000488426 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 FAM129BQ96TA1 746 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 GPR21Q99679 349 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 SIKE1Q9BRV8 207 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 DERL2Q9GZP9 239 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 HCN2Q9UL51 889 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 ABCA7Q8IZY2 2146 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms