RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 BRWD1Q9NSI6 2320 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 TMEM114B3SHH9 223 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PLOD2O00469 737 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 CFLARO15519 480 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ADSLP30566 484 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 CD86P42081 329 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PRPSAP1Q14558 356 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 FUT11Q495W5 492 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PITRM1Q5JRX3 1037 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF362Q5T0B9 420 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 DCAF4L2Q8NA75 395 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 IPMKQ8NFU5 416 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 OR52K1Q8NGK4 314 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF420Q8TAQ5 688 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ATP6V1E2Q96A05 226 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 THAP11Q96EK4 314 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF599Q96NL3 588 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 SEMA3CQ99985 751 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 CINPQ9BW66 212 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 RPF2Q9H7B2 306 aaKnown RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 GNPTGQ9UJJ9 305 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 TRIM64A6NGJ6 449 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 TRIM38O00635 465 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 CACNG3O60359 315 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 HSPA4LO95757 839 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 AP2A1O95782 977 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 ENO3P13929 434 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 CDH3P22223 829 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SLC6A11P48066 632 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SESN2P58004 480 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 CCDC153Q494R4 210 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 KCTD11Q693B1 232 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 YAF2Q8IY57 180 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 MYO1HQ8N1T3 1032 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 RNF148Q8N7C7 305 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 C2orf49Q9BVC5 232 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SLC25A51Q9H1U9 297 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 OBP2AQ9NY56 170 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 MARK1Q9P0L2 795 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SLC17A6Q9P2U8 582 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 CDC14AQ9UNH5 594 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 AP4S1Q9Y587 144 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SMAD6O43541 496 aaKnown RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SULT1C4O75897 302 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 ADH1CP00326 375 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 STK19P49842 368 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 ATXN3P54252 364 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 CRADDP78560 199 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 MESP2Q0VG99 397 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 NAB1Q13506 487 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 GEN1Q17RS7 908 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 NAPRTQ6XQN6 538 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 UNC5BQ8IZJ1 945 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SCAIQ8N9R8 606 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 ARRDC2Q8TBH0 407 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 NUP210Q8TEM1 1887 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 STON2Q8WXE9 905 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 LRTOMTQ8WZ04 291 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SUSD6Q92537 303 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 UHRF1Q96T88 793 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 SLC29A1Q99808 456 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 POLR1EQ9GZS1 481 aaKnown RBP13.6□□□□□ -0.23
COPS7B-221ENST00000488111 TMEM98Q9Y2Y6 226 aa13.6□□□□□ -0.23
COPS7B-221ENST00000488111 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 H3BMQ9 156 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 TMX2-CTNND1H3BSU7 103 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 STX16-NPEPL1H3BU86 382 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 VAPBO95292 243 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 NFATC1O95644 943 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 MMP2P08253 660 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 GSTT2P0CG29 244 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 TPH1P17752 444 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 DCKP27707 260 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 GDI1P31150 447 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 TMED10P49755 219 aaKnown RBP13.59□□□□□ -0.23
COPS7B-221ENST00000488111 RPS3AP61247 264 aaKnown RBP13.59□□□□□ -0.23
COPS7B-221ENST00000488111 FCHO2Q0JRZ9 810 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 MOGQ16653 247 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 OGFOD2Q6N063 350 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 CPNE9Q8IYJ1 553 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 SORCS1Q8WY21 1168 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 ELSPBP1Q96BH3 223 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 ASB9Q96DX5 294 aa13.59□□□□□ -0.23
COPS7B-221ENST00000488111 IMP4Q96G21 291 aaKnown RBP13.59□□□□□ -0.23
COPS7B-221ENST00000488111 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
COPS7B-221ENST00000488111 NSMCE3Q96MG7 304 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms