RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 ATRQ13535 2644 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 PIPSLA2A3N6 862 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CES2O00748 559 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 DDX3YO15523 660 aaKnown RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 PSTPIP1O43586 416 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 TSPAN6O43657 245 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 SPOPO43791 374 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CREB3O43889 395 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 KATNA1O75449 491 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CREG1O75629 220 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 RECKO95980 971 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 GSTA2P09210 222 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 GPD1P21695 349 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 COMTP21964 271 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 PSMA2P25787 234 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CTNNA2P26232 953 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ALDH3A1P30838 453 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 FLT3P36888 993 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 PEX19P40855 299 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 PTPN9P43378 593 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ZNF143P52747 638 aaPredicted RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 TBX4P57082 545 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 KRTAP10-9P60411 292 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 MC2RQ01718 297 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 RPS6KA1Q15418 735 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 TRNP1Q6NT89 227 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 LYSMD3Q7Z3D4 306 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 RHOT1Q8IXI2 618 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ZNF295-AS1Q8N0V1 137 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 EMC1Q8N766 993 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ST6GALNAC3Q8NDV1 305 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 NDRG1Q92597 394 aaKnown RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 ARL8AQ96BM9 186 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 LRRC45Q96CN5 670 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 THOC1Q96FV9 657 aaKnown RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 GDAP1L1Q96MZ0 367 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ZIM3Q96PE6 472 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 PLEKHG4BQ96PX9 1271 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 SLC2A13Q96QE2 648 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 DPYSL5Q9BPU6 564 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CNPY3Q9BT09 278 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 CCDC28BQ9BUN5 200 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 C1QTNF7Q9BXJ2 289 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 TMBIM4Q9HC24 238 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ACSS2Q9NR19 701 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 IL36AQ9UHA7 158 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 G3BP2Q9UN86 482 aaKnown RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 GMEB1Q9Y692 573 aa8.4□□□□□ -1.06
APTX-228ENST00000486724 ARHGEF17Q96PE2 2063 aaPredicted RBP8.4□□□□□ -1.06
APTX-228ENST00000486724 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 COL6A5A8TX70 2615 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 YJEFN3A6XGL0 299 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 RHPN2P1A8MT19 583 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 RNF103O00237 685 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 NEMP1O14524 444 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SMIM24O75264 130 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 LTFP02788 710 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 MYZAPP0CAP1 466 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 DESP17661 470 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 HTR1BP28222 390 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 CD1CP29017 333 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SDC4P31431 198 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 PCK1P35558 622 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 PEX5P50542 639 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 CCL11P51671 97 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 ART1P52961 327 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SRP54P61011 504 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 YWHAZP63104 245 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 NR1D2Q14995 579 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 TAF5Q15542 800 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 DBN1Q16643 649 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 VWA2Q5GFL6 755 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SH2D4BQ5SQS7 431 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 LRRC38Q5VT99 294 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 CPZQ66K79 652 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 HIBCHQ6NVY1 386 aaPredicted RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 CXXC5Q7LFL8 322 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 TAF8Q7Z7C8 310 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SFTPA2Q8IWL1 248 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 LGI2Q8N0V4 545 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 CISD2Q8N5K1 135 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 UBL4BQ8N7F7 174 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 RBMXL3Q8N7X1 1067 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 CHST14Q8NCH0 376 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 RXFP2Q8WXD0 754 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 THAP4Q8WY91 577 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 SEC14L1Q92503 715 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 FAM149B1Q96BN6 582 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 IQCGQ9H095 443 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 NSRP1Q9H0G5 558 aaKnown RBP8.39□□□□□ -1.07
APTX-228ENST00000486724 CARD9Q9H257 536 aa8.39□□□□□ -1.07
APTX-228ENST00000486724 VCX3BQ9H321 246 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms