RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, human

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC4-204	ENST00000486621	LYPLAL1	Q5VWZ2	237 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	MTFR2	Q6P444	385 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	TMEM71	Q6P5X7	295 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	ENPP7	Q6UWV6	458 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	CLEC9A	Q6UXN8	241 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	WDR49	Q8IV35	697 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	SYCP3	Q8IZU3	236 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	GPD1L	Q8N335	351 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	C4orf32	Q8N8J7	132 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	C12orf29	Q8N999	325 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	DENND6B	Q8NEG7	585 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	ATL2	Q8NHH9	583 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	KIAA1524	Q8TCG1	905 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	NINJ1	Q92982	152 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	SYAP1	Q96A49	352 aa	Predicted RBP	4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	AZIN2	Q96A70	460 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	ARSG	Q96EG1	525 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	CYFIP2	Q96F07	1278 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	STAMBPL1	Q96FJ0	436 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	CDK5RAP3	Q96JB5	506 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	ACCS	Q96QU6	501 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	SMAD5	Q99717	465 aa	Known RBP	4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	MMTAG2	Q9BU76	263 aa	Known RBP	4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	ULBP3	Q9BZM4	244 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	PCIF1	Q9H4Z3	704 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	MSL2	Q9HCI7	577 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	PARPBP	Q9NWS1	579 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	GPR83	Q9NYM4	423 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	PADI1	Q9ULC6	663 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	FADS3	Q9Y5Q0	445 aa		4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.6	□□□□□ -1.67
TTC4-204	ENST00000486621	FBN1	P35555	2871 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621		A6NL46	340 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	RNF212B	A8MTL3	300 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621		A8MU76	341 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	FAM171A2	A8MVW0	826 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621		B4DGG1	531 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	C21orf140	B9A014	251 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	NEMP1	O14524	444 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	KIAA0391	O15091	583 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	TSPAN6	O43657	245 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	AP1G1	O43747	822 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	EIF5B	O60841	1220 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	CLSTN1	O94985	981 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	IL18BP	O95998	194 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	PEX11B	O96011	259 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	ADRB3	P13945	408 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	MSX2	P35548	267 aa	Predicted RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	PPM1F	P49593	454 aa	Predicted RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	MEOX1	P50221	254 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	PLK1	P53350	603 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	MYL6	P60660	151 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	NUCB2	P80303	420 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	DNASE1L3	Q13609	305 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	NR1D2	Q14995	579 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	UGT8	Q16880	541 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	ALG11	Q2TAA5	492 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	FAM133B	Q5BKY9	247 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	BMP2KL	Q5H9B9	411 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	ZNF667	Q5HYK9	610 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	EFHC1	Q5JVL4	640 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	TTC38	Q5R3I4	469 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	NKAIN2	Q5VXU1	208 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	SPECC1L	Q69YQ0	1117 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	RUFY3	Q7L099	469 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	UNC93A	Q86WB7	457 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	GPBP1	Q86WP2	473 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	CFAP52	Q8N1V2	620 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	ZNF764	Q96H86	408 aa	Predicted RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	AHCYL2	Q96HN2	611 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	SMR3A	Q99954	134 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	NUDT9	Q9BW91	350 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	C1QTNF7	Q9BXJ2	289 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	DUSP16	Q9BY84	665 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	UBXN6	Q9BZV1	441 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	C12orf65	Q9H3J6	166 aa	Known RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	SMYD3	Q9H7B4	428 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	APMAP	Q9HDC9	416 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	KL	Q9UEF7	1012 aa		4.59	□□□□□ -1.67
TTC4-204	ENST00000486621	STAB1	Q9NY15	2570 aa		4.59	□□□□□ -1.68
TTC4-204	ENST00000486621	PIKFYVE	Q9Y2I7	2098 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	CCL21	O00585	134 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	KLHL41	O60662	606 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	DTNB	O60941	627 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	ZBED1	O96006	694 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	MT-ND3	P03897	115 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	SCG5	P05408	212 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	HEXA	P06865	529 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	ENO2	P09104	434 aa	Predicted RBP	4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	DLAT	P10515	647 aa	Known RBP	4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	NAT2	P11245	290 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	P4HA1	P13674	534 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	PDGFRA	P16234	1089 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	FAH	P16930	419 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	AGA	P20933	346 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	LPO	P22079	712 aa	Predicted RBP	4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	DDIT3	P35638	169 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	IGFALS	P35858	605 aa		4.58	□□□□□ -1.68
TTC4-204	ENST00000486621	GARS	P41250	739 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms