RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CPA5Q8WXQ8 436 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 CENPIQ92674 756 aaPredicted RBP14.89□□□□□ -0.03
U2AF1-211ENST00000486519 ZDHHC12Q96GR4 267 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 KLC4Q9NSK0 619 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 PCMTD2Q9NV79 361 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 DTLQ9NZJ0 730 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 EPHA6Q9UF33 1036 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 ADGRG1Q9Y653 693 aa14.89□□□□□ -0.03
U2AF1-211ENST00000486519 VPS13CQ709C8 3753 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 ANKRD12Q6UB98 2062 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 TRGV8A0A0C4DH27 118 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 TMEM200CA6NKL6 621 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 C2CD4BA6NLJ0 364 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 OR5K4A6NMS3 321 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 ZSCAN22P10073 491 aaPredicted RBP14.88□□□□□ -0.03
U2AF1-211ENST00000486519 CYP2A6P11509 494 aaPredicted RBP14.88□□□□□ -0.03
U2AF1-211ENST00000486519 STX17P56962 302 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 ACY1Q03154 408 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 CDC16Q13042 620 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 NCF4Q15080 339 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 ISM2Q6H9L7 571 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 Q71RC1 249 aaPredicted RBP14.88□□□□□ -0.03
U2AF1-211ENST00000486519 TRIM48Q8IWZ4 208 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 SYTL1Q8IYJ3 562 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 LRFN5Q96NI6 719 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 MCCC1Q96RQ3 725 aaPredicted RBP14.88□□□□□ -0.03
U2AF1-211ENST00000486519 TMEM121Q9BTD3 319 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 SLC40A1Q9NP59 571 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 SIX2Q9NPC8 291 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 KCTD5Q9NXV2 234 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 VPS18Q9P253 973 aa14.88□□□□□ -0.03
U2AF1-211ENST00000486519 MAP1AP78559 2803 aaPredicted RBP14.88□□□□□ -0.03
U2AF1-211ENST00000486519 PCDH17O14917 1159 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 GRID2O43424 1007 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 LDB2O43679 373 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 KLF7O75840 302 aaPredicted RBP14.87□□□□□ -0.03
U2AF1-211ENST00000486519 WISP2O76076 250 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ZNF202O95125 648 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 KLK3P07288 261 aaPredicted RBP14.87□□□□□ -0.03
U2AF1-211ENST00000486519 PDHA1P08559 390 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ZNF8P17098 575 aaPredicted RBP14.87□□□□□ -0.03
U2AF1-211ENST00000486519 AP1S1P61966 158 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TUBB4BP68371 445 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 NSUN2Q08J23 767 aaKnown RBP eCLIP14.87□□□□□ -0.03
U2AF1-211ENST00000486519 SLC10A7Q0GE19 358 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ZNF169Q14929 603 aaPredicted RBP14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ZNF789Q5FWF6 425 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 CRTC3Q6UUV7 619 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ARCQ7LC44 396 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 PRIMA1Q86XR5 153 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TGIF2LYQ8IUE0 185 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 CEP97Q8IW35 865 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 D2HGDHQ8N465 521 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 NPWQ8N729 165 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 CATSPER1Q8NEC5 780 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 GPR150Q8NGU9 434 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 UBXN4Q92575 508 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 NTAN1Q96AB6 310 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 SCRN2Q96FV2 425 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 CNDP1Q96KN2 507 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 NOD2Q9HC29 1040 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 OLAHQ9NV23 265 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TMEM51Q9NW97 253 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 KIAA1468Q9P260 1216 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 ATXN10Q9UBB4 475 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 TRIM10Q9UDY6 481 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 DNAJC16Q9Y2G8 782 aa14.87□□□□□ -0.03
U2AF1-211ENST00000486519 KLK2P20151 261 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 RPL10P27635 214 aaKnown RBP14.86□□□□□ -0.03
U2AF1-211ENST00000486519 SDC4P31431 198 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 GSDMDP57764 484 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 ZFYVE27Q5T4F4 411 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 NAA35Q5VZE5 725 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 NCCRP1Q6ZVX7 275 aaPredicted RBP14.86□□□□□ -0.03
U2AF1-211ENST00000486519 STRADAQ7RTN6 431 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 SLFN11Q7Z7L1 901 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 RAB43Q86YS6 212 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 PHYKPLQ8IUZ5 450 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 AOPEPQ8N6M6 819 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 CLEC1AQ8NC01 280 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 DNAJB14Q8TBM8 379 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 PIH1D2Q8WWB5 315 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 HDAC11Q96DB2 347 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 CLIP3Q96DZ5 547 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 PCMTD1Q96MG8 357 aaPredicted RBP14.86□□□□□ -0.03
U2AF1-211ENST00000486519 TAAR6Q96RI8 345 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 RAB33BQ9H082 229 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 DLL4Q9NR61 685 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 GPATCH2LQ9NWQ4 482 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 P4HTMQ9NXG6 502 aa14.86□□□□□ -0.03
U2AF1-211ENST00000486519 SUCOQ9UBS9 1254 aaKnown RBP14.86□□□□□ -0.03
U2AF1-211ENST00000486519 WDR37Q9Y2I8 494 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms