RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 MATN2O00339 956 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CXCL11O14625 94 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 MEIS2O14770 477 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 RASGRF2O14827 1237 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 RAD51CO43502 376 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CDC14BO60729 498 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 MED24O75448 989 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ERLIN2O94905 339 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OTCP00480 354 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 IL1AP01583 271 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OPN1LWP04000 364 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 HLA-DOAP06340 250 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 FESP07332 822 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ITGA2BP08514 1039 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NUDT17P0C025 328 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 H2AFZP0C0S5 128 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 STAG3L3P0CL85 134 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NCF1P14598 390 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 JUPP14923 745 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 BRAFP15056 766 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NR1D1P20393 614 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NR2F2P24468 414 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 PTAFRP25105 342 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 PON1P27169 355 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 AXLP30530 894 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC7A1P30825 629 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CORO1AP31146 461 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 MDH1P40925 334 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 HTR2BP41595 481 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 STARP49675 285 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 POLGP54098 1239 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ADARP55265 1226 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 EIF3EP60228 445 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 RPS3AP61247 264 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 VBP1P61758 197 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 SNRPFP62306 86 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ARHGAP8P85298 464 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 SRSF2Q01130 221 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OTUD4Q01804 1114 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 GUCY2DQ02846 1103 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ENPEPQ07075 957 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 GALNT2Q10471 571 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TBL3Q12788 808 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CAPSQ13938 189 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ARHGAP19Q14CB8 494 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 PCOLCEQ15113 449 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CNGA2Q16280 664 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CYP2A13Q16696 494 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF568Q3ZCX4 644 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NRN1LQ496H8 165 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 C9orf152Q5JTZ5 239 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CATSPEREQ5SY80 951 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NDUFAF5Q5TEU4 345 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ARHGAP17Q68EM7 881 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 APOBEC3HQ6NTF7 200 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CASC4Q6P4E1 433 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ZCCHC12Q6PEW1 402 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 AFTPHQ6ULP2 937 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 H2AFVQ71UI9 128 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NANOGNBQ7Z5D8 188 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TMCO2Q7Z6W1 182 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TLK2Q86UE8 772 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NT5DC3Q86UY8 548 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CATSPER3Q86XQ3 398 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 COL23A1Q86Y22 540 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM217AQ8IXS0 508 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC43A2Q8N370 569 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OR10H5Q8NGA6 315 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OR52M1Q8NGK5 317 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 OR14K1Q8NGZ2 314 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 WDR48Q8TAF3 677 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 DLG3Q92796 817 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 EDAQ92838 391 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC35C1Q96A29 364 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 EID2BQ96D98 161 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 PHF21BQ96EK2 531 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 EEF2KMTQ96G04 330 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 CAMK1GQ96NX5 476 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 GAL3ST4Q96RP7 486 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TWNKQ96RR1 684 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ADOQ96SZ5 270 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 KRT12Q99456 494 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 HSD17B14Q9BPX1 270 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 LBHD1Q9BQE6 289 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 MTG1Q9BT17 334 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TMEM109Q9BVC6 243 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 BTBD2Q9BX70 525 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 IDI2Q9BXS1 227 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ACE2Q9BYF1 805 aaPredicted RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 FGFBP2Q9BYJ0 223 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 ANO3Q9BYT9 981 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 LRRC19Q9H756 370 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 UCK1Q9HA47 277 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 VAT1LQ9HCJ6 419 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 TUFT1Q9NNX1 390 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 KCNH7Q9NS40 1196 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 DDX28Q9NUL7 540 aaKnown RBP4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 NUDT15Q9NV35 164 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 DMAC2Q9NW81 257 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms