RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 KMT2BQ9UMN6 2715 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 IQANK1A0A1B0GTG1 560 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 UBA6A0AVT1 1052 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 MEI4A8MW99 385 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 TOR1BO14657 336 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 PRMT5O14744 637 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 KRT37O76014 449 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 HOXC4P09017 264 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 MSH3P20585 1137 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 CD27P26842 260 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 AKT1P31749 480 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 NSG1P42857 185 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 LIMK2P53671 638 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 ADARP55265 1226 aaKnown RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 CDK3Q00526 305 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 DEFB119Q8N690 84 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 FAM174AQ8TBP5 190 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 SERAC1Q96JX3 654 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 PKNOX2Q96KN3 472 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 APOOQ9BUR5 198 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 ZCCHC2Q9C0B9 1178 aaKnown RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 CLPBQ9H078 707 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 CCDC68Q9H2F9 335 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 PCDHB1Q9Y5F3 818 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 COMMD10Q9Y6G5 202 aa21.55■■□□□ 1.04
NECAB3-211ENST00000485399 TPRP12270 2363 aaKnown RBP21.55■■□□□ 1.04
NECAB3-211ENST00000485399 SPAG17Q6Q759 2223 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 OR1I1O60431 355 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 SASH3O75995 380 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 ITGA2BP08514 1039 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 F7P08709 466 aaPredicted RBP21.54■■□□□ 1.04
NECAB3-211ENST00000485399 RPS3P23396 243 aaKnown RBP eCLIP21.54■■□□□ 1.04
NECAB3-211ENST00000485399 TMEFF1Q8IYR6 380 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 TMEM145Q8NBT3 493 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 MTBPQ96DY7 904 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 VPS39Q96JC1 886 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 HSPA12BQ96MM6 686 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 TRIM39Q9HCM9 518 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 LGALS13Q9UHV8 139 aa21.54■■□□□ 1.04
NECAB3-211ENST00000485399 GOLGA6L10A6NI86 522 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 F8W8V4 182 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 CACNB4O00305 520 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 VEGFDO43915 354 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 ESR1P03372 595 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 SNRPAP09012 282 aaKnown RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 MYCLP1P12525 358 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 ATP1B2P14415 290 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 FMO4P31512 558 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 POLD2P49005 469 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 CLDN2P57739 230 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 YPEL5P62699 121 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 TMEM115Q12893 351 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 CSRP2Q16527 193 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 PRR23CQ6ZRP0 262 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 SLC41A1Q8IVJ1 513 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 NETO1Q8TDF5 533 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 FUBP1Q96AE4 644 aaKnown RBP21.53■■□□□ 1.04
NECAB3-211ENST00000485399 ATXN7L3BQ96GX2 97 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 BMFQ96LC9 184 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 ORAI3Q9BRQ5 295 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 BOCQ9BWV1 1114 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 P2RY12Q9H244 342 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 EURLQ9NYK6 297 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 TBK1Q9UHD2 729 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 GNPTGQ9UJJ9 305 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 OR1A2Q9Y585 309 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 ACACBO00763 2458 aa21.53■■□□□ 1.04
NECAB3-211ENST00000485399 POM121BA6NF01 834 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 H3BMM5 538 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 AGPSO00116 658 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 SLC30A4O14863 429 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 OPA1O60313 960 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 MYZAPP0CAP1 466 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 PKMP14618 531 aaKnown RBP21.52■■□□□ 1.04
NECAB3-211ENST00000485399 ABCG1P45844 678 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 PFN3P60673 137 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 B4GALNT1Q00973 533 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 GTF2H3Q13889 308 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 TMED2Q15363 201 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 WDR45BQ5MNZ6 344 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 MROH9Q5TGP6 573 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 KYAT3Q6YP21 454 aaKnown RBP21.52■■□□□ 1.04
NECAB3-211ENST00000485399 GCNT7Q6ZNI0 430 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 ABI3BPQ7Z7G0 1075 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 TRIM74Q86UV6 250 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 GPATCH11Q8N954 259 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 CNTNAP3BQ96NU0 1288 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 GPR22Q99680 433 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 AARSD1Q9BTE6 412 aaKnown RBP21.52■■□□□ 1.04
NECAB3-211ENST00000485399 CNTNAP3Q9BZ76 1288 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 CTNNAL1Q9UBT7 734 aa21.52■■□□□ 1.04
NECAB3-211ENST00000485399 MTO1Q9Y2Z2 717 aaKnown RBP21.52■■□□□ 1.04
NECAB3-211ENST00000485399 OAS3Q9Y6K5 1087 aaKnown RBP21.52■■□□□ 1.04
NECAB3-211ENST00000485399 BPTFQ12830 3046 aa21.52■■□□□ 1.03
NECAB3-211ENST00000485399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.51■■□□□ 1.03
NECAB3-211ENST00000485399 FAM95CA0A1B0GW59 222 aa21.51■■□□□ 1.03
NECAB3-211ENST00000485399 A6NNZ2 444 aa21.51■■□□□ 1.03
NECAB3-211ENST00000485399 QSOX1O00391 747 aa21.51■■□□□ 1.03
NECAB3-211ENST00000485399 RGS16O15492 202 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms