RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 CHUKO15111 745 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 KMOO15229 486 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 CD48P09326 243 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 MYBL1P10243 752 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 BRAFP15056 766 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 FOLR1P15328 257 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 CCNCP24863 283 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 COL8A1P27658 744 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 PTPN4P29074 926 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 RPS18P62269 152 aaKnown RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 GALNT2Q10471 571 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 PIGHQ14442 188 aaPredicted RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 UGT8Q16880 541 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ALS2CLQ60I27 953 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 TIGD7Q6NT04 549 aaPredicted RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ABRAXAS1Q6UWZ7 409 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 PRSS42Q7Z5A4 293 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 TEKT4Q8WW24 435 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 THAP4Q8WY91 577 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 BTBD6Q96KE9 485 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 TSGA13Q96PP4 275 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ING2Q9H160 280 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ZFYVE1Q9HBF4 777 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ACSS2Q9NR19 701 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 EPHA6Q9UF33 1036 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 AMACRQ9UHK6 382 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
TMEM54-206ENST00000482771 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 OR52A4PA6NMU1 304 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 MFSD11O43934 449 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 MTA2O94776 668 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 HLA-DQB2P05538 268 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SKILP12757 684 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 IDSP22304 550 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 CD86P42081 329 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
TMEM54-206ENST00000482771 CAPZBP47756 277 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 DRG2P55039 364 aaKnown RBP12.59□□□□□ -0.39
TMEM54-206ENST00000482771 MYL5Q02045 173 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 GPR18Q14330 331 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 KCNAB1Q14722 419 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 CPZQ66K79 652 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 LRRTM4Q86VH4 590 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SIDT2Q8NBJ9 832 aaKnown RBP12.59□□□□□ -0.39
TMEM54-206ENST00000482771 GPR26Q8NDV2 337 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SEC14L1Q92503 715 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 GLYATL1Q969I3 302 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 CXorf40BQ96DE9 158 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 TRIM11Q96F44 468 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 FCRL4Q96PJ5 515 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 BRD8Q9H0E9 1235 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 MLXIPLQ9NP71 852 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 HAUS2Q9NVX0 235 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 AIPL1Q9NZN9 384 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 FARSAQ9Y285 508 aaKnown RBP12.59□□□□□ -0.39
TMEM54-206ENST00000482771 PCDHGA9Q9Y5G4 932 aaKnown RBP12.59□□□□□ -0.39
TMEM54-206ENST00000482771 SEC16AO15027 2179 aa12.59□□□□□ -0.39
TMEM54-206ENST00000482771 TCP11X1B4DZS4 312 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 GPR89AB7ZAQ6 455 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 MTX2O75431 263 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 CDK14O94921 469 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 DDAH2O95865 285 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 JCHAINP01591 159 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 MMP2P08253 660 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 GPR89BP0CG08 455 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 PPP1CAP62136 330 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 PDE1BQ01064 536 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
TMEM54-206ENST00000482771 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 MRPL49Q13405 166 aaKnown RBP12.58□□□□□ -0.4
TMEM54-206ENST00000482771 TUBB3Q13509 450 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 PAFAH1B3Q15102 231 aaKnown RBP12.58□□□□□ -0.4
TMEM54-206ENST00000482771 ATP13A4Q4VNC1 1196 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 DOPEY1Q5JWR5 2465 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 ZNF569Q5MCW4 686 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 FAM182AQ5T1J6 154 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 ZNF787Q6DD87 383 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 SASS6Q6UVJ0 657 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 CERS6Q6ZMG9 384 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 ZNF547Q8IVP9 402 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 RBM12BQ8IXT5 1001 aaKnown RBP12.58□□□□□ -0.4
TMEM54-206ENST00000482771 CCNYQ8ND76 341 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 ZSCAN5AQ9BUG6 496 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 MFRPQ9BY79 579 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 RAB33BQ9H082 229 aa12.58□□□□□ -0.4
TMEM54-206ENST00000482771 HSD3B7Q9H2F3 369 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms