RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ACRV1P26436 265 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ARCN1P48444 511 aaKnown RBP19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 SRP54P61011 504 aaKnown RBP19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 SEMA3AQ14563 771 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 CSRP2Q16527 193 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 IL27RAQ6UWB1 636 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 DET1Q7L5Y6 550 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 HDXQ7Z353 690 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ADGRG6Q86SQ4 1221 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 DDHD1Q8NEL9 900 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZBTB9Q96C00 473 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 CCDC97Q96F63 343 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 DCUN1D1Q96GG9 259 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ELF4Q99607 663 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 COPS8Q99627 209 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZDHHC5Q9C0B5 715 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ACSS3Q9H6R3 686 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 CARS2Q9HA77 564 aaKnown RBP19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 IL21RQ9HBE5 538 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 TRIM39Q9HCM9 518 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZNF446Q9NWS9 450 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 SLC17A6Q9P2U8 582 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 PRKAB1Q9Y478 270 aa19.7■□□□□ 0.74
TRAPPC12-220ENST00000482645 EXOC1LA0A1B0GW35 172 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 SDC3O75056 442 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 LRP3O75074 770 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 CDK14O94921 469 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 RASGRP1O95267 797 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 NUDT17P0C025 328 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZNF8P17098 575 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 JUNDP17535 347 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 PMLP29590 882 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 GNPDA1P46926 289 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 IFFO1Q0D2I5 559 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 TMEM115Q12893 351 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 GTF2H3Q13889 308 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 DBN1Q16643 649 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 KBTBD12Q3ZCT8 623 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 AASDHQ4L235 1098 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 HSP90AA5PQ58FG0 334 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZNF470Q6ECI4 717 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 PHACTR4Q8IZ21 702 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 RBFAQ8N0V3 343 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 MINDY1Q8N5J2 469 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 BOCQ9BWV1 1114 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZCCHC2Q9C0B9 1178 aaKnown RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 TCEAL2Q9H3H9 227 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 IARS2Q9NSE4 1012 aaKnown RBP19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 MOCS1Q9NZB8 636 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZNHIT2Q9UHR6 403 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 KLF15Q9UIH9 416 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 RABGEF1Q9UJ41 708 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 SUFUQ9UMX1 484 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 SLC17A4Q9Y2C5 497 aa19.69■□□□□ 0.74
TRAPPC12-220ENST00000482645 TRBV5-4A0A0C4DH59 114 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 AGAP14A8MT82 685 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 GFRA3O60609 400 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 CER1O95813 267 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 F7P08709 466 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 ARRB1P49407 418 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 MGAT5Q09328 741 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 FRG1Q14331 258 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 KLHL38Q2WGJ6 581 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 AARS2Q5JTZ9 985 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 MRNIPQ6NTE8 343 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 NEPROQ6NW34 567 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 CRTC3Q6UUV7 619 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 PRR23CQ6ZRP0 262 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 CTAGE3PQ8IX95 158 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 MRRFQ96E11 262 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZIM3Q96PE6 472 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 TTC1Q99614 292 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 EDEM2Q9BV94 578 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 FUT8Q9BYC5 575 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 SLC13A1Q9BZW2 595 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 SMYD2Q9NRG4 433 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 RXFP3Q9NSD7 469 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZDHHC3Q9NYG2 299 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 ZFATQ9P243 1243 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 VPS18Q9P253 973 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 APOBEC3BQ9UH17 382 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 GPSM3Q9Y4H4 160 aa19.68■□□□□ 0.74
TRAPPC12-220ENST00000482645 RIF1Q5UIP0 2472 aaKnown RBP19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 SMIM23A6NLE4 172 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 OR2AG2A6NM03 316 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 H3BM21 787 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 VEGFDO43915 354 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 TNFP01375 233 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 FUCA1P04066 466 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 CSF2P04141 144 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 RALBP11234 206 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 HK3P52790 923 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 PLA2G4EQ3MJ16 856 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 SDCCAG8Q86SQ7 713 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 GALNT13Q8IUC8 556 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 TRAPPC5Q8IUR0 188 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 OXR1Q8N573 874 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 CDKL2Q92772 493 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 SGSM3Q96HU1 749 aa19.67■□□□□ 0.74
TRAPPC12-220ENST00000482645 RUFY1Q96T51 708 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms