RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SLC45A4Q5BKX6 768 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DCAF17Q5H9S7 520 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 FAM209AQ5JX71 171 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 COLEC12Q5KU26 742 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 RNF219Q5W0B1 726 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 KCTD16Q68DU8 428 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 GJB7Q6PEY0 223 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 LINGO4Q6UY18 593 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 Q6ZSR6 202 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 EFL1Q7Z2Z2 1120 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CLEC14AQ86T13 490 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 TMEM110Q86TL2 294 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SLC35F3Q8IY50 421 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 RBFAQ8N0V3 343 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DEFB106AQ8N104 65 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CISD2Q8N5K1 135 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF557Q8N988 423 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF548Q8NEK5 533 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 MAPK15Q8TD08 544 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SNX21Q969T3 373 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 FAM149B1Q96BN6 582 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 BTN2A3PQ96KV6 586 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SLC2A13Q96QE2 648 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DDX50Q9BQ39 737 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CLPBQ9H078 707 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 UPF2Q9HAU5 1272 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 METTL14Q9HCE5 456 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SMURF1Q9HCE7 757 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 PREBQ9HCU5 417 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DNAJC28Q9NX36 388 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF212Q9UDV6 495 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 USP25Q9UHP3 1055 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 VPS51Q9UID3 782 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 VANGL2Q9ULK5 521 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CNTN6Q9UQ52 1028 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 HS3ST2Q9Y278 367 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 TBC1D30Q9Y2I9 924 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CEP83Q9Y592 693 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 HS3ST4Q9Y661 456 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 POLQO75417 2590 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CCDC88CQ9P219 2028 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF106Q9H2Y7 1883 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 APCP25054 2843 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ANKRD17O75179 2603 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 DIDO1Q9BTC0 2240 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 SYNJ2BP-COX16A0A087WUM0 186 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 BECN2A8MW95 431 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 F5H5T6 163 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 GOLGA6L22H0YM25 854 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 KPNA3O00505 521 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 NTN3O00634 580 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ALOX15BO15296 676 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PMM2O15305 246 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 SLC16A3O15427 465 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 MAGEC1O60732 1142 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ENDOD1O94919 500 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 TNFSF15O95150 251 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PCDH8O95206 1070 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 MOCS3O95396 460 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PAK4O96013 591 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 APOEP02649 317 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 CSF2P04141 144 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 HGFP14210 728 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 TBXAS1P24557 533 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 GKP32189 559 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ETV5P41161 510 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 CSRP3P50461 194 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 UCNP55089 124 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PFN3P60673 137 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 YWHAEP62258 255 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 YWHAZP63104 245 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 SULT2A1Q06520 285 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF177Q13360 481 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 C1orf61Q13536 156 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ACCSLQ4AC99 568 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 RAB6CQ53S08 254 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 COBLL1Q53SF7 1204 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 BROXQ5VW32 411 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 FAM46CQ5VWP2 391 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ATL3Q6DD88 541 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 TRNP1Q6NT89 227 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ZCCHC8Q6NZY4 707 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 FAM111BQ6SJ93 734 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 KYAT3Q6YP21 454 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 DPY19L3Q6ZPD9 716 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 SPATC1Q76KD6 591 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ERN2Q76MJ5 926 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PTAR1Q7Z6K3 402 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-207ENST00000477676 JAZF1Q86VZ6 243 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 SFTPA2Q8IWL1 248 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 LSMEM2Q8N112 164 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 PPM1KQ8N3J5 372 aa4.64□□□□□ -1.67
CKS1B-207ENST00000477676 ATP6V0D2Q8N8Y2 350 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms