RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PLD5Q8N7P1 536 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 MFSD3Q96ES6 412 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 OSBPL11Q9BXB4 747 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CLK4Q9HAZ1 481 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 DERAQ9Y315 318 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 NR2F6P10588 404 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CAPGP40121 348 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 GNPDA1P46926 289 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 MST1RQ04912 1400 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 DCTN2Q13561 401 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 KLHL35Q6PF15 583 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 LCLAT1Q6UWP7 414 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 C7orf61Q8IZ16 206 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 LOC110117498-PIK3R3F6TDL0 507 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CCNE2O96020 404 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 LMO2P25791 158 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 NOMO1Q15155 1222 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 FAM131AQ6UXB0 335 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 EIF1ADQ8N9N8 165 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 A0A075B6Q4 140 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 C9IYK1 514 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 HCN1O60741 890 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GJA9P57773 515 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 IL18Q14116 193 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 IL23RQ5VWK5 629 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GPR65Q8IYL9 337 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 AP3S1Q92572 193 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CEP295NLQ96MC4 621 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CNPPD1Q9BV87 410 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 AK5Q9Y6K8 562 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 TMEM88BA6NKF7 163 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 RYKP34925 604 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 ATXN1P54253 815 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 ESRP1Q6NXG1 681 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 FRRS1Q6ZNA5 592 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CPSF7Q8N684 471 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 FAM47BQ8NA70 645 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 METTL21AQ8WXB1 218 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 LPIN3Q9BQK8 851 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 KCNN2Q9H2S1 579 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 PIGUQ9H490 435 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 IPPKQ9H8X2 491 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 HBS1LQ9Y450 684 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 FAM86C2PA6NEL3 165 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 AXIN1O15169 862 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 POU2F1P14859 743 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CDH3P22223 829 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CRYBG2Q8N1P7 616 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GAL3ST4Q96RP7 486 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 RTKNQ9BST9 563 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 RSL24D1Q9UHA3 163 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 SAMD4AQ9UPU9 718 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 PCDHB1Q9Y5F3 818 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 DBIP07108 87 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 LAMP2P13473 410 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 PGDP52209 483 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 MAPK12P53778 367 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 RIPK1Q13546 671 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 SLC1A5Q15758 541 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CLIP4Q8N3C7 705 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 NKD1Q969G9 470 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 DNAJC11Q9NVH1 559 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 COL1A2P08123 1366 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 PLSCR1O15162 318 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 PRODHO43272 600 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 TSPAN1O60635 241 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 LRCH4O75427 683 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 NDST3O95803 873 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GOT2P00505 430 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 COL6A1P12109 1028 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 TSHRP16473 764 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 NR4A1P22736 598 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 CDK9P50750 372 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 NAA20P61599 178 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 IL18R1Q13478 541 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 GRM3Q14832 879 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 ATAT1Q5SQI0 421 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 ATXN7L2Q5T6C5 722 aaPredicted RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 ZMIZ2Q8NF64 920 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 FAM81AQ8TBF8 368 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 FAR1Q8WVX9 515 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 MAML3Q96JK9 1138 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 NKIRAS2Q9NYR9 191 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 MRTO4Q9UKD2 239 aaKnown RBP10.88□□□□□ -0.67
VAPB-204ENST00000475243 IRAK3Q9Y616 596 aa10.88□□□□□ -0.67
VAPB-204ENST00000475243 MYBPHLA2RUH7 354 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 RNF225M0QZC1 329 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms