RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 EP400Q96L91 3159 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 EML5Q05BV3 1969 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 KDM4FA0A1W2PPD8 638 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 HEATR9A2RTY3 570 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CST8O60676 142 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CILPO75339 1184 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 BCL10O95999 233 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 IGLV3-25P01717 112 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 RETP07949 1114 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PCNAP12004 261 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ACPPP15309 386 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PRPH2P23942 346 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SLC16A2P36021 539 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GP5P40197 560 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 RECQLP46063 649 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 SOX9P48436 509 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NUDT2P50583 147 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SMARCB1Q12824 385 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 IKQ13123 557 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 DMP1Q13316 513 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 DNASE1L3Q13609 305 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 IHHQ14623 411 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SURF1Q15526 300 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 LRRC26Q2I0M4 334 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 C5orf22Q49AR2 442 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZNF628Q5EBL2 1059 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZBTB41Q5SVQ8 909 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MANEALQ5VSG8 457 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NXNQ6DKJ4 435 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 DENND1BQ6P3S1 775 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 FAM122CQ6P4D5 195 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ANKS3Q6ZW76 656 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GPR149Q86SP6 731 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ERO1BQ86YB8 467 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CEP97Q8IW35 865 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 FAM178BQ8IXR5 827 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 FAM71DQ8N9W8 422 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GRPEL2Q8TAA5 225 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PIWIL1Q96J94 861 aaKnown RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 MARK4Q96L34 752 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TEX37Q96LM6 180 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZNF583Q96ND8 569 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SNX25Q9H3E2 840 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 WDR55Q9H6Y2 383 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 VPS37BQ9H9H4 285 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 LTB4R2Q9NPC1 389 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TMOD2Q9NZR1 351 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SLC6A5Q9Y345 797 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 LINC01387J3KSC0 135 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 AP3B1O00203 1094 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PTP4A3O75365 173 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 KCNH1O95259 989 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PAPSS2O95340 614 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 PIPP12273 146 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 CCND2P30279 289 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 LIPAP38571 399 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CBX5P45973 191 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TCP10Q12799 353 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MICBQ29980 383 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MAP7D1Q3KQU3 841 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GRAMD1BQ3KR37 738 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FAM182AQ5T1J6 154 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC35F1Q5T1Q4 408 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GK5Q6ZS86 529 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF767PQ75MW2 155 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 NOXA1Q86UR1 476 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MAPKAPK5Q8IW41 473 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 BRSK2Q8IWQ3 736 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 RAVER1Q8IY67 606 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 DCP1BQ8IZD4 617 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 RNF113BQ8IZP6 322 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 SVOPLQ8N434 492 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TMEM199Q8N511 208 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CCDC185Q8N715 623 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FAM156AQ8NDB6 213 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SHCBP1Q8NEM2 672 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TOR1AIP2Q8NFQ8 470 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 HAVCR2Q8TDQ0 301 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ELMO3Q96BJ8 720 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 C12orf42Q96LP6 360 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PSKH2Q96QS6 385 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 JAM3Q9BX67 310 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC7A5P2Q9GIP4 190 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MINDY3Q9H8M7 445 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MRPS18AQ9NVS2 196 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 AIG1Q9NVV5 245 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZC3H7BQ9UGR2 993 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 BTRCQ9Y297 605 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FNDC3AQ9Y2H6 1198 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 AP3M1Q9Y2T2 418 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MTF2Q9Y483 593 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 CACNG2Q9Y698 323 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SZT2Q5T011 3432 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ANKRD61A6NGH8 418 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MROH6A6NGR9 719 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TOR1AO14656 332 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PLOD3O60568 738 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 XYLBO75191 536 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF254O75437 659 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms