RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 CD101Q93033 1021 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM120BQ96EK7 910 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 WBP1Q96G27 269 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 EGLN2Q96KS0 407 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 SEMA3CQ99985 751 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 TEX12Q9BXU0 123 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PIGMQ9H3S5 423 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PLK3Q9H4B4 646 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 BLOC1S4Q9NUP1 217 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 MTMR10Q9NXD2 777 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PSD3Q9NYI0 1048 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 FBXO2Q9UK22 296 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PDS5AQ29RF7 1337 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ZCWPW2A0A1B0GU75 182 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 OR5K3A6NET4 321 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 LRRC72A6NJI9 287 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 BMPR1BO00238 502 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 DVL1O14640 695 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 AFPP02771 609 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 ATP1A1P05023 1023 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 CLTBP09497 229 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 RARGP13631 454 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 MYOD1P15172 320 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 GABRB1P18505 474 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 MSH2P43246 934 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 FMO5P49326 533 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 CLDN20P56880 219 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 EPS8Q12929 822 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 CHAF1BQ13112 559 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 ITPRIPL1Q6GPH6 555 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 CFAP77Q6ZQR2 320 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 C9orf139Q6ZV77 190 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 NFE4Q86UQ8 179 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 MAP7D3Q8IWC1 876 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 SLC5A8Q8N695 610 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 DUSP19Q8WTR2 217 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 SLC20A1Q8WUM9 679 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 SLC38A5Q8WUX1 472 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 NSUN4Q96CB9 384 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 ELMOD3Q96FG2 381 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 UHRF2Q96PU4 802 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 PKP4Q99569 1192 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 CCDC68Q9H2F9 335 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 SETD4Q9NVD3 440 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 RCC2Q9P258 522 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 FBXL17Q9UF56 701 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 AMACRQ9UHK6 382 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 VPS28Q9UK41 221 aa3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-213ENST00000474240 A6NCN8 305 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 B4DLN1 442 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM72CH0Y354 149 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 C16orf97H3BN30 126 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 SYNGR3O43761 229 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FGF17O60258 216 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 MITFO75030 526 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 TPPPO94811 219 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 HLA-DOBP13765 273 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 CSF2RAP15509 400 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 NR2C2P49116 596 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 ARSEP51690 589 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF132P52740 706 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 MRPL12P52815 198 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 DVL1P1P54792 670 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 DLX5P56178 289 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 BRWD1-AS2P59051 145 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 MRPS5P82675 430 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 MC1RQ01726 317 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 CDC16Q13042 620 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 CUL4AQ13619 759 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 KCNC3Q14003 757 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 WTAPQ15007 396 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 DUSP28Q4G0W2 176 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM72AQ5TYM5 149 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM72DQ6L9T8 149 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FASTKD5Q7L8L6 764 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 SATL1Q86VE3 508 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM72BQ86X60 149 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 ODF3L1Q8IXM7 274 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 C1orf52Q8N6N3 182 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 PPFIBP2Q8ND30 876 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 DMBX1Q8NFW5 382 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 ZKSCAN4Q969J2 545 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 RHBDF1Q96CC6 855 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 SAT2Q96F10 170 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 MRPL1Q9BYD6 325 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 FTOQ9C0B1 505 aaKnown RBP eCLIP3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 LRMDAQ9H2I8 198 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 OSGEPL1Q9H4B0 414 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 TCF7L2Q9NQB0 619 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 HAUS2Q9NVX0 235 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 KCNS2Q9ULS6 477 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 PADI3Q9ULW8 664 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 TMEM5Q9Y2B1 443 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 OR2W1Q9Y3N9 320 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms