RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DPF1Q92782 380 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ORAI1Q96D31 301 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 APOLD1Q96LR9 279 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 RMDN2Q96LZ7 410 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CCDC114Q96M63 670 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF830Q96NB3 372 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 SEMA3CQ99985 751 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ANKRD2Q9GZV1 360 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 C2orf40Q9H1Z8 148 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 R3HDMLQ9H3Y0 253 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 COPS7BQ9H9Q2 264 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 OLAHQ9NV23 265 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 TRNAU1APQ9NX07 287 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE2DQ9UEU5 116 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 TMEM184BQ9Y519 407 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 POMT1Q9Y6A1 747 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 SQORQ9Y6N5 450 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF541Q9H0D2 1346 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 TMEM272A0A1B0GTI8 110 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 ADAM10O14672 748 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 ZBTB43O43298 467 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 HSPA12AO43301 675 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 ZIC3O60481 467 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 CYP19A1P11511 503 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 ATP6V1B1P15313 513 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 MTHFRP42898 656 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 CLCNKAP51800 687 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 NUDT6P53370 316 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 DECR1Q16698 335 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 EIF2S3LQ2VIR3 472 aaKnown RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF284Q2VY69 593 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 TWISTNBQ3B726 338 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 C6orf163Q5TEZ5 329 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 PXDC1Q5TGL8 231 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 MORN5Q5VZ52 161 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 TYW3Q6IPR3 259 aaKnown RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 FAM122CQ6P4D5 195 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 SHQ1Q6PI26 577 aaKnown RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 PAPD4Q6PIY7 484 aaKnown RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 SLC2A7Q6PXP3 512 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 SHC4Q6S5L8 630 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 B3GNT6Q6ZMB0 384 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 Q6ZTK2 550 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 NUP93Q8N1F7 819 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 TMEM199Q8N511 208 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 C16orf52Q8NHV5 167 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 THAP6Q8TBB0 222 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 COQ8BQ96D53 544 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 FNBP1Q96RU3 617 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 MGME1Q9BQP7 344 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 HAUS8Q9BT25 410 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 QTRT1Q9BXR0 403 aaKnown RBP4.2□□□□□ -1.74
BRCA1-212ENST00000473961 DNAI2Q9GZS0 605 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 MMP25Q9NPA2 562 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 DPP3Q9NY33 737 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 MTRRQ9UBK8 725 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 FBXL2Q9UKC9 423 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 FZD10Q9ULW2 581 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 GRIP1Q9Y3R0 1128 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 LOXL2Q9Y4K0 774 aa4.2□□□□□ -1.74
BRCA1-212ENST00000473961 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 IGLV5-39A0A0G2JS06 123 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 RPS10-NUDT3A0A1W2PQS6 291 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 ANXA2P2A6NMY6 339 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 H0YGN5 161 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SSX4O60224 188 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE7O76087 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 EPN2O95208 641 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 TGDSO95455 350 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 C22orf31O95567 290 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CH25HO95992 272 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 TMEM191BP0C7N4 346 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE12FP0CL80 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE12GP0CL81 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE12IP0CL82 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SRCP12931 536 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 HOXC8P31273 242 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 HOXC13P31276 330 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 TCF7P36402 384 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 NPY4RP50391 375 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CTSCP53634 463 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 POLGP54098 1239 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 HNRNPH2P55795 449 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 PPP2R2BQ00005 443 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CDK3Q00526 305 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 ROR2Q01974 943 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 COL10A1Q03692 680 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 TRAF2Q12933 501 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE1Q13065 139 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE4Q13068 117 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 PTK6Q13882 451 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 MYBPC2Q14324 1141 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 ASIC2Q16515 512 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SRSF7Q16629 238 aaKnown RBP eCLIP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SUPT20HL1Q3ZLR7 823 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 Q4G0T1 1027 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SFMBT2Q5VUG0 894 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 NSUN5P2Q63ZY6 315 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CAVIN1Q6NZI2 390 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms