RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 EPOP01588 193 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 FUT4P22083 530 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 FASP25445 335 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RFC2P35250 354 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 YAP1P46937 504 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 GALK1P51570 392 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SGSHP51688 502 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ARPP19P56211 112 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 BNIP2Q12982 314 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SELPLGQ14242 412 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RPS6KA2Q15349 733 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 KCNA10Q16322 511 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 PTPRNQ16849 979 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 NANOGP8Q6NSW7 305 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TTC33Q6PID6 262 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 Q6ZSR9 355 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RAB44Q7Z6P3 723 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 PTRH1Q86Y79 214 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 LRRC43Q8N309 656 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TRPV3Q8NET8 790 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 EEF1AKMT1Q8WVE0 214 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 PEX13Q92968 403 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 FUBP3Q96I24 572 aaKnown RBP eCLIP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 MGME1Q9BQP7 344 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 CORO1BQ9BR76 489 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TIMMDC1Q9NPL8 285 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RNF103-CHMP3A0A140T963 221 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 E2F3O00716 465 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 INPPL1O15357 1258 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 B4GAT1O43505 415 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 KLK8O60259 260 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RSL1D1O76021 490 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 NDST3O95803 873 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SERPINF2P08697 491 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 OR4D2P58180 307 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RPS24P62847 133 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 FKBP1BP68106 108 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 CAP1Q01518 475 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 PMS2P3Q13401 168 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 INPP5AQ14642 412 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 KCTD21Q4G0X4 260 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SLC44A4Q53GD3 710 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ANKS6Q68DC2 871 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 PRMT9Q6P2P2 845 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SLC2A7Q6PXP3 512 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 CLVS1Q8IUQ0 354 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 LGI2Q8N0V4 545 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ISG20Q96AZ6 181 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SEPHS2Q99611 448 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TRIM54Q9BYV2 358 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 BRINP2Q9C0B6 783 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ACTL8Q9H568 366 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 BPIFA1Q9NP55 256 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 TAS2R13Q9NYV9 303 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SUN2Q9UH99 717 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 EIF2B4Q9UI10 523 aaKnown RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 MAGED1Q9Y5V3 778 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-214ENST00000473778 H3BNC9 293 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 EEDO75530 441 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 OR4F21O95013 312 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ATE1O95260 518 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ESRRBO95718 433 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 TCF3P15923 654 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 TACR2P21452 398 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 IL10P22301 178 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 HTR6P50406 440 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 PLCL1Q15111 1095 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 COQ5Q5HYK3 327 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 LETMD1Q6P1Q0 360 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 LYSMD3Q7Z3D4 306 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 GLT6D1Q7Z4J2 308 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 RALGPS2Q86X27 583 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 TMEM199Q8N511 208 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 PACRGLQ8N7B6 248 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CDYL2Q8N8U2 506 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ADAMTS16Q8TE57 1224 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 C12orf43Q96C57 262 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 KCTD14Q9BQ13 255 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 DCUN1D5Q9BTE7 237 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 NPLQ9BXD5 320 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 LTB4R2Q9NPC1 389 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 INTS10Q9NVR2 710 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 GID8Q9NWU2 228 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 PCDHB5Q9Y5E4 795 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 PCDHGC4Q9Y5F7 938 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms