RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PTGIRP43119 386 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CAPZBP47756 277 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CLCNKAP51800 687 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CDH6P55285 790 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 GBE1Q04446 702 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 TYRO3Q06418 890 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 ITKQ08881 620 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 ZBTB17Q13105 803 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 GPS2Q13227 327 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 GALNT3Q14435 633 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 INPP5JQ15735 1006 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-223ENST00000473345 TDRD12Q587J7 1177 aaKnown RBP9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CACHD1Q5VU97 1274 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 PAPD7Q5XG87 772 aaKnown RBP9.45□□□□□ -0.9
MCF2L-223ENST00000473345 FAM83HQ6ZRV2 1179 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-223ENST00000473345 B4GALNT4Q76KP1 1039 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 AOPEPQ8N6M6 819 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 SLC41A2Q96JW4 573 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 RANBP9Q96S59 729 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 NUDT9Q9BW91 350 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 MFRPQ9BY79 579 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 OSGEPL1Q9H4B0 414 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 FAM83DQ9H4H8 585 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 PCDH9Q9HC56 1237 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 CASS4Q9NQ75 786 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 RBM22Q9NW64 420 aaKnown RBP eCLIP9.45□□□□□ -0.9
MCF2L-223ENST00000473345 SPO11Q9Y5K1 396 aa9.45□□□□□ -0.9
MCF2L-223ENST00000473345 MED13Q9UHV7 2174 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 ITPR2Q14571 2701 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 CSMD1Q96PZ7 3565 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 MATN3O15232 486 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 VPS4BO75351 444 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 CEACAM4O75871 244 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 RASSF9O75901 435 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 CAPN1P07384 714 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 CCL11P51671 97 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 ITGA1P56199 1179 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 FOXL2P58012 376 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 TAS2R40P59535 323 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 PEX6Q13608 980 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 DPYSL3Q14195 570 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 IL11RAQ14626 422 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 PAFAH1B3Q15102 231 aaKnown RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 NOMO1Q15155 1222 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 UGT8Q16880 541 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 CT47A1Q5JQC4 288 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 IRGCQ6NXR0 463 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 JMJD6Q6NYC1 403 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 ABRAXAS1Q6UWZ7 409 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF517Q6ZMY9 492 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 SH3KBP1Q96B97 665 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 MAP3K3Q99759 626 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 POLR1EQ9GZS1 481 aaKnown RBP9.44□□□□□ -0.9
MCF2L-223ENST00000473345 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 RMI1Q9H9A7 625 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 PADI1Q9ULC6 663 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 VPS4AQ9UN37 437 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 SHOC2Q9UQ13 582 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 PCDHB3Q9Y5E6 796 aa9.44□□□□□ -0.9
MCF2L-223ENST00000473345 SPTBN1Q01082 2364 aaKnown RBP9.43□□□□□ -0.9
MCF2L-223ENST00000473345 OR5K4A6NMS3 321 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ANKRD66B4E2M5 251 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 KCNK1O00180 336 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 LCA5LO95447 670 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 LDLRP01130 860 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 GZMAP12544 262 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF7P17097 686 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-223ENST00000473345 BPIP17213 487 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 AMD1P17707 334 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 PTPN4P29074 926 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 CASP14P31944 242 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 MAN1A1P33908 653 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ARL4AP40617 200 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 PRKCIP41743 596 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 CD86P42081 329 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF135P52742 658 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-223ENST00000473345 CTSCP53634 463 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 EPHB1P54762 984 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ABRQ12979 859 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TUBB3Q13509 450 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 GPR19Q15760 415 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 BOLA3Q53S33 107 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 HGSNATQ68CP4 663 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 SLC6A19Q695T7 634 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 DUS1LQ6P1R4 473 aaKnown RBP9.43□□□□□ -0.9
MCF2L-223ENST00000473345 SASS6Q6UVJ0 657 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TMC3Q7Z5M5 1100 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 PPP1R3BQ86XI6 285 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 PHYKPLQ8IUZ5 450 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TEKT4Q8WW24 435 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 INPP5DQ92835 1189 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 GLYATL1Q969I3 302 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TADA1Q96BN2 335 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TSGA13Q96PP4 275 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms