RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 IGLV3-16A0A075B6K0 115 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 CALCOCO2Q13137 446 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 TCEA2Q15560 299 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 C8orf74Q6P047 294 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 CHST15Q7LFX5 561 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-204ENST00000472959 TMEM135Q86UB9 458 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 PIANPQ8IYJ0 282 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 MMGT1Q8N4V1 131 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 CEP112Q8N8E3 955 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 MFSD3Q96ES6 412 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 APOLD1Q96LR9 279 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 PCYT1BQ9Y5K3 369 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-204ENST00000472959 MAD1L1Q9Y6D9 718 aa20.51■□□□□ 0.87
TOP3A-204ENST00000472959 DNMT3AQ9Y6K1 912 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-204ENST00000472959 OR51F1A6NGY5 319 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 KCNJ13O60928 360 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 CKMT2P17540 419 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 PPARGP37231 505 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 RPIAP49247 311 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 CDKN1CP49918 316 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 DUSP3P51452 185 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 CLCNKAP51800 687 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 ITIH4Q14624 930 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 FASTKD1Q53R41 847 aaKnown RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 AARS2Q5JTZ9 985 aaKnown RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 FNBP1LQ5T0N5 605 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 KIAA0930Q6ICG6 404 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-204ENST00000472959 OGFOD3Q6PK18 319 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 SLC30A9Q6PML9 568 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 CRTC3Q6UUV7 619 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 TRAPPC5Q8IUR0 188 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 ZNF547Q8IVP9 402 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 STAMBPL1Q96FJ0 436 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 TIMM29Q9BSF4 260 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 NAT9Q9BTE0 207 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 TAAR2Q9P1P5 351 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 PLEKHM1Q9Y4G2 1056 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 ST14Q9Y5Y6 855 aa20.5■□□□□ 0.87
TOP3A-204ENST00000472959 KLHL33A6NCF5 533 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 GIPC1O14908 333 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 TP73O15350 636 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 CKMT1AP12532 417 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ACP5P13686 325 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ATP1B2P14415 290 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ZNF7P17097 686 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 VCLP18206 1134 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 AK4P27144 223 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ACTR1BP42025 376 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 DRG2P55039 364 aaKnown RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ARL4CP56559 192 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ACTR1AP61163 376 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 SIM1P81133 766 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 B4GALNT1Q00973 533 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 DBN1Q16643 649 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 HIF1AQ16665 826 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ANKRD20A4Q4UJ75 823 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 PPM1JQ5JR12 505 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 TMEM220Q6QAJ8 160 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 CES3Q6UWW8 571 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 DGLUCYQ7Z3D6 616 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 CCNJLQ8IV13 435 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 ARL10Q8N8L6 244 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 LRRC39Q96DD0 335 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 DPH5Q9H2P9 285 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 DPEP2Q9H4A9 486 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 CATSPERZQ9NTU4 200 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 SPATS2LQ9NUQ6 558 aaKnown RBP20.49■□□□□ 0.87
TOP3A-204ENST00000472959 RPS6KL1Q9Y6S9 549 aa20.49■□□□□ 0.87
TOP3A-204ENST00000472959 SPAARA0A1B0GVQ0 90 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 CD3EAPO15446 510 aaKnown RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 ZNF500O60304 480 aaPredicted RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 USP1O94782 785 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 VAPBO95292 243 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 TTC4O95801 387 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 POLBP06746 335 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 PRSS56P0CW18 603 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 PGAM1P18669 254 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 NSG1P42857 185 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 CTSCP53634 463 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 DAB2P98082 770 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 CAV1Q03135 178 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 DHX9Q08211 1270 aaKnown RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 CBLBQ13191 982 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 NR0B2Q15466 257 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 INSCQ1MX18 579 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 BBS9Q3SYG4 887 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 BCL7AQ4VC05 210 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 PACS1Q6VY07 963 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 AGGF1Q8N302 714 aaeCLIP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 SGF29Q96ES7 293 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 EBNA1BP2Q99848 306 aaKnown RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 LRRC1Q9BTT6 524 aa20.48■□□□□ 0.87
TOP3A-204ENST00000472959 APOBEC2Q9Y235 224 aaKnown RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 COL5A1P20908 1838 aaPredicted RBP20.48■□□□□ 0.87
TOP3A-204ENST00000472959 ZNF106Q9H2Y7 1883 aaKnown RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 LRP4O75096 1905 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 OR2AG2A6NM03 316 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 POP7O75817 140 aaKnown RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 AP2A2O94973 939 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 ACP1P24666 158 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms