RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 RAD52P43351 418 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 STT3AP46977 705 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 NR2C2P49116 596 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 EVCP57679 992 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CLDN2P57739 230 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SUMO1P63165 101 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 EIF3IQ13347 325 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 MSLNQ13421 630 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 LSAMPQ13449 338 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 FGL2Q14314 439 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 KIR3DS1Q14943 382 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 C16orf72Q14CZ0 275 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SF1Q15637 639 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SNCBQ16143 134 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 PRSS53Q2L4Q9 553 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SETMARQ53H47 684 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SLC35F1Q5T1Q4 408 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 HECTD3Q5T447 861 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 MROH9Q5TGP6 573 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ZNF776Q68DI1 518 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 OR6B2Q6IFH4 312 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 TLDC1Q6P9B6 456 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 HTR3DQ70Z44 454 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 LIMS2Q7Z4I7 341 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 IQCHQ86VS3 1027 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 DCP2Q8IU60 420 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 PHC2Q8IXK0 858 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CACNA2D3Q8IZS8 1091 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SLC22A18ASQ8N1D0 253 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 LSMEM1Q8N8F7 131 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ZSWIM2Q8NEG5 633 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 MCPH1Q8NEM0 835 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 OR14C36Q8NHC7 312 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 BCAS4Q8TDM0 211 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 THAP3Q8WTV1 239 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CACTINQ8WUQ7 758 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 UCMAQ8WVF2 138 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 IFT81Q8WYA0 676 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 PTPRN2Q92932 1015 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 FATE1Q969F0 183 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 MYLPFQ96A32 169 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SGK3Q96BR1 496 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 INTS12Q96CB8 462 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CLIP3Q96DZ5 547 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 DNAJC7Q99615 494 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ZFYVE21Q9BQ24 234 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CALN1Q9BXU9 219 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 MRPL4Q9BYD3 311 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 PARD6BQ9BYG5 372 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 STRADBQ9C0K7 418 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 HAUS4Q9H6D7 363 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 UCK1Q9HA47 277 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 NCOA5Q9HCD5 579 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 GPR27Q9NS67 375 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ASF1BQ9NVP2 202 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 DNAJC28Q9NX36 388 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SLC39A1Q9NY26 324 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 ADAM21Q9UKJ8 722 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 CFL2Q9Y281 166 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 NCKAP1Q9Y2A7 1128 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.41□□□□□ -1.76e-7■■■□□ 17.8
LMNB1-205ENST00000472034 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 TLN2Q9Y4G6 2542 aa4.41□□□□□ -1.7
LMNB1-205ENST00000472034 SVEP1Q4LDE5 3571 aa4.4□□□□□ -1.7
LMNB1-205ENST00000472034 AKAP6Q13023 2319 aa4.4□□□□□ -1.7
LMNB1-205ENST00000472034 ANKUB1A6NFN9 424 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 OR5K4A6NMS3 321 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 GOLGA8BA8MQT2 603 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 C22orf46C9J442 243 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 H7BY64 318 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 EBAG9O00559 213 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 AQP7O14520 342 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 NPC1O15118 1278 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 STX6O43752 255 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 DLX3O60479 287 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 MAFKO60675 156 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 PPP6R2O75170 966 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 DNAJC8O75937 253 aaPredicted RBP4.4□□□□□ -1.71
LMNB1-205ENST00000472034 RHOBTB3O94955 611 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 SNX4O95219 450 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 KLKB1P03952 638 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 DBHP09172 617 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 COX6B1P14854 86 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 CPA3P15088 417 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 PDGFRAP16234 1089 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 BPIP17213 487 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 M6PRP20645 277 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 HNRNPH1P31943 449 aaKnown RBP4.4□□□□□ -1.71
LMNB1-205ENST00000472034 CCKBRP32239 447 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 CD86P42081 329 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 HALP42357 657 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 MAGEA11P43364 429 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 HAAOP46952 286 aa4.4□□□□□ -1.71
LMNB1-205ENST00000472034 NPTX2P47972 431 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms