RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ZFP90Q8TF47 636 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 FBXO32Q969P5 355 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 EMID1Q96A84 441 aaPredicted RBP9.88□□□□□ -0.83
NUP50-214ENST00000469163 TRAF4Q9BUZ4 470 aaPredicted RBP9.88□□□□□ -0.83
NUP50-214ENST00000469163 BCL2L14Q9BZR8 327 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 MPP6Q9NZW5 540 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 ENPP5Q9UJA9 477 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 PCDHGA2Q9Y5H1 932 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 KCNE2Q9Y6J6 123 aa9.88□□□□□ -0.83
NUP50-214ENST00000469163 BET1O15155 118 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 GLAP06280 429 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CKMP06732 381 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 DLDP09622 509 aaKnown RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 IGFBP4P22692 258 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 DCKP27707 260 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARSEP51690 589 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARFIP1P53367 373 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 S100A12P80511 92 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 PEX6Q13608 980 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 GALEQ14376 348 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARMC4Q5T2S8 1044 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CHST15Q7LFX5 561 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 HORMAD1Q86X24 394 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CHERPQ8IWX8 916 aaKnown RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 WDTC1Q8N5D0 677 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 TMEM80Q96HE8 168 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CYP2S1Q96SQ9 504 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 LGALS13Q9UHV8 139 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARHGEF9O43307 516 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ADAM11O75078 769 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 HEXBP07686 556 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ATF2P15336 505 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 RFX1P22670 979 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 GDI2P50395 445 aaKnown RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 COPAP53621 1224 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 BTN1A1Q13410 526 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CA9Q16790 459 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 SLC39A5Q6ZMH5 540 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 TPGS1Q6ZTW0 290 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 C16orf59Q7L2K0 433 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARCQ7LC44 396 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ARNTL2Q8WYA1 636 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ING5Q8WYH8 240 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 TEKT5Q96M29 485 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 NPLQ9BXD5 320 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 CXXC1Q9P0U4 656 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 SUCOQ9UBS9 1254 aaKnown RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 MAPRE3Q9UPY8 281 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 SF3B1O75533 1304 aaKnown RBP eCLIP9.87□□□□□ -0.833e-9■■■■■ 206.8
NUP50-214ENST00000469163 COL1A2P08123 1366 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 MYO18AQ92614 2054 aaKnown RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 TTC24A2A3L6 582 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 SYN3O14994 580 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 PRPF4O43172 522 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP50-214ENST00000469163 PAPSS1O43252 624 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 CABYRO75952 493 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 NCF2P19878 526 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 CYP3A5P20815 502 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 BGNP21810 368 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 EPHA3P29320 983 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CTNNB1P35222 781 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 PTGIRP43119 386 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 SLC11A1P49279 550 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 SESN2P58004 480 aaPredicted RBP9.87□□□□□ -0.83
NUP50-214ENST00000469163 CRADDP78560 199 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 FLOT2Q14254 428 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 C16orf62Q7Z3J2 963 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 CAMK1DQ8IU85 385 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 DNAAF3Q8N9W5 541 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 OR7D4Q8NG98 312 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 OR10T2Q8NGX3 314 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ACTL9Q8TC94 416 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 TCP10LQ8TDR4 215 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 WWP1Q9H0M0 922 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 DNPEPQ9ULA0 475 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 ANKRD6Q9Y2G4 727 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 TTC28Q96AY4 2481 aa9.87□□□□□ -0.83
NUP50-214ENST00000469163 SLC12A8A0AV02 714 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 KRT87PA6NCN2 255 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 LPXNO60711 386 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 ZMPSTE24O75844 475 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 CLTBP09497 229 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 KLRC2P26717 231 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 NUBP1P53384 320 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 BCAT1P54687 386 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 ERVFC1P60507 584 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 BST2Q10589 180 aaKnown RBP9.86□□□□□ -0.83
NUP50-214ENST00000469163 GPR68Q15743 365 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 POM121L1PQ3SYA9 428 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 GTF2IRD2BQ6EKJ0 949 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 DPY19L3Q6ZPD9 716 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 KCTD8Q6ZWB6 473 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 GTF2IRD2Q86UP8 949 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
NUP50-214ENST00000469163 TAGAPQ8N103 731 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms