RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NAGSQ8N159 534 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 MDM1Q8TC05 714 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 CCDC74AQ96AQ1 378 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 PPP1R2P1Q96PQ5 205 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 DEPDC7Q96QD5 511 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 SPATA16Q9BXB7 569 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 TLR10Q9BXR5 811 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-205ENST00000468338 ABCG4Q9H172 646 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 TRIM39Q9HCM9 518 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL4A6-205ENST00000468338 ATXN10Q9UBB4 475 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 PLEKHM1Q9Y4G2 1056 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 PCDHB1Q9Y5F3 818 aa11.03□□□□□ -0.64
COL4A6-205ENST00000468338 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.64
COL4A6-205ENST00000468338 A6NCN8 305 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 GAPDHSO14556 408 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 CSO75390 466 aaKnown RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 SLC25A14O95258 325 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 METTL18O95568 372 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ASMTLO95671 621 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF8P17098 575 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 TNNT3P45378 269 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 CLCNKAP51800 687 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 OLIG2Q13516 323 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 PRPSAP1Q14558 356 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 SIX1Q15475 284 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ATP13A5Q4VNC0 1218 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 KHDC1Q4VXA5 237 aaKnown RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF569Q5MCW4 686 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ALS2CLQ60I27 953 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 IGF2-ASQ6U949 168 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 RBM44Q6ZP01 1051 aaKnown RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 MARK2Q7KZI7 788 aaKnown RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 GLT6D1Q7Z4J2 308 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ADGRG6Q86SQ4 1221 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 GALNT13Q8IUC8 556 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ARL14Q8N4G2 192 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 FAM71DQ8N9W8 422 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 BRSK1Q8TDC3 778 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 NXPE2Q96DL1 559 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 FICDQ9BVA6 458 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 FSD1LQ9BXM9 530 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 BPIFA1Q9NP55 256 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 LZTFL1Q9NQ48 299 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-205ENST00000468338 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 ENTPD2Q9Y5L3 495 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 RNF215Q9Y6U7 377 aa11.02□□□□□ -0.65
COL4A6-205ENST00000468338 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 A0A1W2PNU3 283 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 B4DGG1 531 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 J3QL48 77 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 GRID2O43424 1007 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 B4GAT1O43505 415 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 LIASO43766 372 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 VEGFDO43915 354 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ECEL1O95672 775 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 LPOP22079 712 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SPAM1P38567 509 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ACTR1BP42025 376 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 FASLGP48023 281 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 LSSP48449 732 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 MAZP56270 477 aaKnown RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ACTR1AP61163 376 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 CCL7P80098 99 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 B4GALNT1Q00973 533 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SQSTM1Q13501 440 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 TAF1AQ15573 450 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 P3H1Q32P28 736 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SEL1L2Q5TEA6 688 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 DRICH1Q6PGQ1 229 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SPRED1Q7Z699 444 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF547Q8IVP9 402 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SFRP1Q8N474 314 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 BLOC1S5Q8TDH9 187 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ALS2CR12Q96Q35 445 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 OR2AG1Q9H205 316 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 LRRN3Q9H3W5 708 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ZDHHC3Q9NYG2 299 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 LRIT1Q9P2V4 623 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ZNHIT2Q9UHR6 403 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 CELSR3Q9NYQ7 3312 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 ZZEF1O43149 2961 aa11.01□□□□□ -0.65
COL4A6-205ENST00000468338 D6RAR5 112 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 TGFBR3LH3BV60 316 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PPM1DO15297 605 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 LDB2O43679 373 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 NRDCO43847 1150 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 AP2A1O95782 977 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms