RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 OR14J1Q9UGF5 321 aa2.66□□□□□ -1.98
GTF3C3-209ENST00000466862 HAO1Q9UJM8 370 aa2.66□□□□□ -1.98
GTF3C3-209ENST00000466862 C1orf226A1L170 272 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 A6NL46 340 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 H0YIN7 160 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 IFRD1O00458 451 aaPredicted RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 ATP2A1O14983 1001 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 TGFB1I1O43294 461 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 BUD23O43709 281 aaKnown RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 SYNCRIPO60506 623 aaKnown RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 NKX2-2O95096 273 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 KCNK5O95279 499 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 FAM157CP0CG43 387 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 SELLP14151 372 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 LIFP15018 202 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 AZU1P20160 251 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 MMP15P51511 669 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 MRPS5P82675 430 aaKnown RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 NEXNQ0ZGT2 675 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 BIRC2Q13490 618 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 ZNF805Q5CZA5 627 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 STXBP4Q6ZWJ1 553 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 DNAAF4Q8WXU2 420 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 MOCOSQ96EN8 888 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 MMABQ96EY8 250 aaPredicted RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 SLC47A1Q96FL8 570 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 EGLN2Q96KS0 407 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 RBM4BQ9BQ04 359 aaKnown RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 PSD2Q9BQI7 771 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 PIGMQ9H3S5 423 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 APOBEC3GQ9HC16 384 aaKnown RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 UBA2Q9UBT2 640 aaPredicted RBP2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 DNAJB4Q9UDY4 337 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 ASIC3Q9UHC3 531 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 JRKLQ9Y4A0 524 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 CYP46A1Q9Y6A2 500 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 FLT1P17948 1338 aa2.65□□□□□ -1.99
GTF3C3-209ENST00000466862 A0A1W2PRG0 241 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 MEIOCA2RUB1 952 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 DUXAA6NLW8 204 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 MAGEB17A8MXT2 336 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 ICAM1P05362 532 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 SP100P23497 879 aaPredicted RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 ITGA3P26006 1051 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 EPHA2P29317 976 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 F2RL1P55085 397 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 EIF3BP55884 814 aaKnown RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 TAF12Q16514 161 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 ZNF239Q16600 458 aaKnown RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 FAM69AQ5T7M9 428 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 FAAP20Q6NZ36 180 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 CDC73Q6P1J9 531 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 ZNF613Q6PF04 617 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 SEPT14Q6ZU15 432 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 SH2D6Q7Z4S9 175 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 BMPERQ8N8U9 685 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 ANKRD42Q8N9B4 389 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 DDHD1Q8NEL9 900 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 PPHLN1Q8NEY8 458 aaKnown RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 UTP15Q8TED0 518 aaKnown RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 FAM222BQ8WU58 562 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 SAAL1Q96ER3 474 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 PIP5K1AQ99755 562 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 TRIM15Q9C019 465 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 SIL1Q9H173 461 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 PRKRIP1Q9H875 184 aaPredicted RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 VEZTQ9HBM0 779 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 KCNJ14Q9UNX9 436 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 CAMK2AQ9UQM7 478 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 NAALADL1Q9UQQ1 740 aa2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 MRPS28Q9Y2Q9 187 aaKnown RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 COL5A2P05997 1499 aaPredicted RBP2.64□□□□□ -1.99
GTF3C3-209ENST00000466862 PRAG1Q86YV5 1406 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 TEX13DA0A0J9YY54 714 aaPredicted RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 CCDC196A0A1B0GTZ2 297 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 KANSL1LA0AUZ9 987 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 NPIPB15A6NHN6 443 aaPredicted RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 EIF4E1BA6NMX2 242 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 H7C423 109 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 MAP2K7O14733 419 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 DCXO43602 365 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 TFAP2AP05549 437 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 LIPFP07098 398 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 DPEP1P16444 411 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 NR2F2P24468 414 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 WNT5AP41221 380 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 CTCFP49711 727 aaPredicted RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 MRPS34P82930 218 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 PNLIPRP3Q17RR3 467 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 CTU2Q2VPK5 515 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 FFAR4Q5NUL3 377 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 TSSK4Q6SA08 328 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 SH2D5Q6ZV89 423 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 TSPAN33Q86UF1 283 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 SCML4Q8N228 414 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 RASGEF1CQ8N431 466 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 GBGT1Q8N5D6 347 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 GCSAMQ8N6F7 178 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 OR2T12Q8NG77 320 aa2.63□□□□□ -1.99
GTF3C3-209ENST00000466862 ST8SIA4Q92187 359 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms