RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC4-205ENST00000465563 GJD2Q9UKL4 321 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 STK36Q9NRP7 1315 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 EIF4E1BA6NMX2 242 aaKnown RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 TNFSF14O43557 240 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 SYNCRIPO60506 623 aaKnown RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 KRT19P08727 400 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 HSD3B1P14060 373 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 EIF3BP55884 814 aaKnown RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 FFAR4Q5NUL3 377 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 FAM69AQ5T7M9 428 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 SUSD1Q6UWL2 747 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 PAF1Q8N7H5 531 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 PPHLN1Q8NEY8 458 aaKnown RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 OR1J2Q8NGS2 313 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 PPP4R1Q8TF05 950 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 HVCN1Q96D96 273 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 MOCOSQ96EN8 888 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 VGLL1Q99990 258 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 RBM4BQ9BQ04 359 aaKnown RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 SIX2Q9NPC8 291 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 ABI3Q9P2A4 366 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 UBA2Q9UBT2 640 aaPredicted RBP4.54□□□□□ -1.68
SMC4-205ENST00000465563 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
SMC4-205ENST00000465563 FLT1P17948 1338 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 MEIOCA2RUB1 952 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 EIF3CLB5ME19 914 aaKnown RBP4.53□□□□□ -1.68
SMC4-205ENST00000465563 DCXO43602 365 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 JRKO75564 520 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 NKX2-2O95096 273 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 MLYCDO95822 493 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 CSRP3P50461 194 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 KCNJ10P78508 379 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 CDC16Q13042 620 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 CDONQ4KMG0 1287 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 TSSK4Q6SA08 328 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 ANKRD52Q8NB46 1076 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 FGFBP3Q8TAT2 258 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 GCC1Q96CN9 775 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 RNF125Q96EQ8 232 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 UBXN10Q96LJ8 280 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 SMC6Q96SB8 1091 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 SEMA3CQ99985 751 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 CAPN7Q9Y6W3 813 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 MAU2Q9Y6X3 613 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 SMCHD1A6NHR9 2005 aa4.53□□□□□ -1.68
SMC4-205ENST00000465563 C1orf226A1L170 272 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 C15orf62A8K5M9 175 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 MAGEB17A8MXT2 336 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 PLOD2O00469 737 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 SLC22A2O15244 555 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 WISP2O76076 250 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 EML2O95834 649 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 CLPTM1O96005 669 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 POLBP06746 335 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 LIPFP07098 398 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 ITGA3P26006 1051 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 BMXP51813 675 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 CYP26C1Q6V0L0 522 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 P2RY8Q86VZ1 359 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 PM20D2Q8IYS1 436 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 SLC5A8Q8N695 610 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 EMC1Q8N766 993 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 OR2T6Q8NHC8 308 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 NFKBIDQ8NI38 313 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 GMPPAQ96IJ6 420 aaPredicted RBP4.52□□□□□ -1.69
SMC4-205ENST00000465563 SLX1AQ9BQ83 275 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 CABLES2Q9BTV7 478 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 SLC25A18Q9H1K4 315 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 MAGIXQ9H6Y5 334 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 COPG2Q9UBF2 871 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 MKLN1Q9UL63 735 aa4.52□□□□□ -1.69
SMC4-205ENST00000465563 IGKV6D-41A0A0C4DH26 115 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 CCDC196A0A1B0GTZ2 297 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 KCNK5O95279 499 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 LIFP15018 202 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 KRT9P35527 623 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 CTSCP53634 463 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 ZNF239Q16600 458 aaKnown RBP4.51□□□□□ -1.69
SMC4-205ENST00000465563 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 NSUN5P2Q63ZY6 315 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 HM13Q8TCT9 377 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 ECHDC1Q9NTX5 307 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 ATAD3AQ9NVI7 634 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 PTTG2Q9NZH5 202 aa4.51□□□□□ -1.69
SMC4-205ENST00000465563 EXOGQ9Y2C4 368 aaKnown RBP4.51□□□□□ -1.69
SMC4-205ENST00000465563 KANSL1LA0AUZ9 987 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 BMP10O95393 424 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 F9P00740 461 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 TYMPP19971 482 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 PRCPP42785 496 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 RAB6CQ53S08 254 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 ZNF805Q5CZA5 627 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 NDUFAF5Q5TEU4 345 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 CDC73Q6P1J9 531 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms