RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MROH9Q5TGP6 573 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 PNCKQ6P2M8 343 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 TRPM8Q7Z2W7 1104 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 SNX20Q7Z614 316 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 TRIM42Q8IWZ5 723 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 TMEFF1Q8IYR6 380 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 ZBTB44Q8NCP5 570 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 ISL2Q96A47 359 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 ORAI3Q9BRQ5 295 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 DUSP15Q9H1R2 295 aaPredicted RBP16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.27
EXOSC3-203ENST00000465229 SCN8AQ9UQD0 1980 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 A0A1W2PPC4 97 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 GSTA1P08263 222 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 ITGALP20701 1170 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 HNRNPA2B1P22626 353 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 GPR1P46091 355 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 SEMA3AQ14563 771 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 GPR33Q49SQ1 333 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 FASTKD1Q53R41 847 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 PSAPL1Q6NUJ1 521 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 GBP7Q8N8V2 638 aaPredicted RBP16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 GPR150Q8NGU9 434 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 FAM111AQ96PZ2 611 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 MYOCQ99972 504 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 LRFN3Q9BTN0 628 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 IARS2Q9NSE4 1012 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 CATSPERZQ9NTU4 200 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 KLHL14Q9P2G3 628 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 TXNDC16Q9P2K2 825 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 CNOT6Q9ULM6 557 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 USP34Q70CQ2 3546 aa16.76■□□□□ 0.27
EXOSC3-203ENST00000465229 TRBV5-4A0A0C4DH59 114 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 PCCBP05166 539 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 ITGA2BP08514 1039 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 IGFALSP35858 605 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 TRIM23P36406 574 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 NUDT1P36639 197 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 SERPINB4P48594 390 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 CSE1LP55060 971 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 ITGA9Q13797 1035 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 BMPR2Q13873 1038 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 INPP5AQ14642 412 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 RAET1GQ6H3X3 334 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 KYAT3Q6YP21 454 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 TAS2R42Q7RTR8 314 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 LDB1Q86U70 411 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 DENND6AQ8IWF6 608 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 CNTN4Q8IWV2 1026 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 TMEM145Q8NBT3 493 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 DENND6BQ8NEG7 585 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 RAB3IL1Q8TBN0 382 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 SNX19Q92543 992 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 FOXJ1Q92949 421 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 HSPA12BQ96MM6 686 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 SLC17A6Q9P2U8 582 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 DMTF1Q9Y222 760 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 CA5BQ9Y2D0 317 aa16.75■□□□□ 0.27
EXOSC3-203ENST00000465229 POM121BA6NF01 834 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 PRAMEF26H0Y7S4 382 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 BIRC5O15392 142 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CD27P26842 260 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 AKT2P31751 481 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CNR2P34972 360 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 SPRP35270 261 aaPredicted RBP16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 PTGER3P43115 390 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CLDN2P57739 230 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CTBP1Q13363 440 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 INSCQ1MX18 579 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 MRNIPQ6NTE8 343 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CDHR3Q6ZTQ4 885 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 FAM47EQ6ZV65 393 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 C11orf74Q86VG3 221 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 SERPINA9Q86WD7 417 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CILP2Q8IUL8 1156 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 CALML6Q8TD86 181 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 BTN2A2Q8WVV5 523 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 BMFQ96LC9 184 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 FAM167BQ9BTA0 163 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 SMOXQ9NWM0 555 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 EIF2B4Q9UI10 523 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 HS3ST3A1Q9Y663 406 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 KMT2EQ8IZD2 1858 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 ALDOAP04075 364 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 PYGLP06737 847 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 F7P08709 466 aaPredicted RBP16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 MAOBP27338 520 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 TEAD1P28347 426 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 MAGEA12P43365 314 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 PLK5Q496M5 336 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 ADAMTSL4Q6UY14 1074 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 SDCCAG8Q86SQ7 713 aaPredicted RBP16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 LMNTD2Q8IXW0 634 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 NXPE1Q8N323 547 aa16.74■□□□□ 0.27
EXOSC3-203ENST00000465229 DNASE2BQ8WZ79 361 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms