RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CTAGE8P0CG41 777 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 ANOS1P23352 680 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 PON1P27169 355 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 MSH2P43246 934 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 AMPHP49418 695 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 MLLT10P55197 1068 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 IKQ13123 557 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-205ENST00000464541 KRT81Q14533 505 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 PDSS1Q5T2R2 415 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 OR7E24Q6IFN5 339 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 Q75L30 129 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 ATG9AQ7Z3C6 839 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 SMIM29Q86T20 159 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 SLC9B2Q86UD5 537 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 ARID3BQ8IVW6 561 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-205ENST00000464541 CTAGE4Q8IX94 777 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 C1orf131Q8NDD1 294 aaKnown RBP5.71□□□□□ -1.5
PTCD3-205ENST00000464541 SLC44A1Q8WWI5 657 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 EPYCQ99645 322 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 MMP28Q9H239 520 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 SMARCAD1Q9H4L7 1026 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 TCF7L2Q9NQB0 619 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 BLOC1S4Q9NUP1 217 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 EXO1Q9UQ84 846 aaKnown RBP5.71□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF644Q9H582 1327 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-205ENST00000464541 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 H3BQ06 376 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-205ENST00000464541 AP3D1O14617 1153 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 CAPN9O14815 690 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 CRYAAP02489 173 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 GM2AP17900 193 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 AHRP35869 848 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 RUNX1T1Q06455 604 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 RAB6CQ53S08 254 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 CCNYL2Q5T2Q4 361 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 RASGEF1CQ8N431 466 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 SLC5A8Q8N695 610 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 DMBX1Q8NFW5 382 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 RDM1Q8NG50 284 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 OR13A1Q8NGR1 328 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 PHF21AQ96BD5 680 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 UHRF2Q96PU4 802 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 RAB6CQ9H0N0 254 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 LRMDAQ9H2I8 198 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 NOTCH4Q99466 2003 aa5.7□□□□□ -1.5
PTCD3-205ENST00000464541 PRAG1Q86YV5 1406 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 TMEM8BA6NDV4 472 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 PTGES3LE9PB15 166 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 VILLO15195 856 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 EIF3DO15371 548 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 SYNGR3O43761 229 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 FGF17O60258 216 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 PDE9AO76083 593 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 DRG2P55039 364 aaKnown RBP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 COG7P83436 770 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 PLEKHS1Q5SXH7 462 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 FAM109BQ6ICB4 259 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 KIAA0930Q6ICG6 404 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 FAM171BQ6P995 826 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 KCTD8Q6ZWB6 473 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 DCUN1D3Q8IWE4 304 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 KBTBD3Q8NAB2 608 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 SCRN2Q96FV2 425 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 ABHD8Q96I13 439 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 FTOQ9C0B1 505 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 RCC2Q9P258 522 aaKnown RBP5.69□□□□□ -1.5
PTCD3-205ENST00000464541 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
PTCD3-205ENST00000464541 A0A0B4J293 547 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 ANKRD18BA2A2Z9 1011 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 P2RY10O00398 339 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 XPNPEP2O43895 674 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 TPPPO94811 219 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 IGHV4-39P01824 125 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 CLTBP09497 229 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 HRH2P25021 359 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 HADHAP40939 763 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 GARSP41250 739 aaKnown RBP5.68□□□□□ -1.5
PTCD3-205ENST00000464541 ARCN1P48444 511 aaKnown RBP5.68□□□□□ -1.5
PTCD3-205ENST00000464541 ACVR2BQ13705 512 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 ZDHHC20Q5W0Z9 365 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 GALNT5Q7Z7M9 940 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 NODALQ96S42 347 aa5.68□□□□□ -1.5
PTCD3-205ENST00000464541 POLR3CQ9BUI4 534 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-205ENST00000464541 MARCH4Q9P2E8 410 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-205ENST00000464541 FSD2A1L4K1 749 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 DOK2O60496 412 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 LMX1BO60663 402 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF217O75362 1048 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 KCNK5O95279 499 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 GH2P01242 217 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 UMODP07911 640 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 NR2F2P24468 414 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 PHEXP78562 749 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 MRPS5P82675 430 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 RPL24P83731 157 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 SPOCK1Q08629 439 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms