RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 B4GALNT1Q00973 533 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 SLC14A1Q13336 389 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 C1orf61Q13536 156 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GTF2H3Q13889 308 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CRYMQ14894 314 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 TCEA2Q15560 299 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 LONRF1Q17RB8 773 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PYCR3Q53H96 274 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 SPANXN3Q5MJ09 141 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 UNC5AQ6ZN44 842 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 KANSL1Q7Z3B3 1105 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CCDC25Q86WR0 208 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GALNT13Q8IUC8 556 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 SLC25A45Q8N413 288 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 RASGEF1AQ8N9B8 481 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 HEXDCQ8WVB3 486 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CFAP36Q96G28 342 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 OR2M4Q96R27 311 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 BOCQ9BWV1 1114 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CLPBQ9H078 707 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 TMEM168Q9H0V1 697 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PLAC1Q9HBJ0 212 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 UCKL1Q9NWZ5 548 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 TRNAU1APQ9NX07 287 aaKnown RBP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 IL1RAPL1Q9NZN1 696 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 MARCH4Q9P2E8 410 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 ZNHIT2Q9UHR6 403 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PRKAB1Q9Y478 270 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PCDHGB2Q9Y5G2 931 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 BPTFQ12830 3046 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 OR2AG2A6NM03 316 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 RALBP11234 206 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CD59P13987 128 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 ECHS1P30084 290 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CTSCP53634 463 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 LIMK1P53667 647 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 ARHGAP8P85298 464 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CUL1Q13616 776 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 ITIH4Q14624 930 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 SUZ12Q15022 739 aaKnown RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 ELOCQ15369 112 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 AARS2Q5JTZ9 985 aaKnown RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 LYPLAL1Q5VWZ2 237 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 STEAP4Q687X5 459 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 NEPROQ6NW34 567 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 TMEM220Q6QAJ8 160 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CRTC3Q6UUV7 619 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CERS6Q6ZMG9 384 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 DET1Q7L5Y6 550 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CHST15Q7LFX5 561 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 LDB1Q86U70 411 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 LRRTM4Q86VH4 590 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 ZNF547Q8IVP9 402 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 IFT20Q8IY31 132 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 UNC5BQ8IZJ1 945 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 FSTL5Q8N475 847 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 OTUD6BQ8N6M0 293 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CCL4L1Q8NHW4 92 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 NETO1Q8TDF5 533 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 PYROXD1Q8WU10 500 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 NAT14Q8WUY8 206 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 SGF29Q96ES7 293 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 DCUN1D1Q96GG9 259 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 TTC1Q99614 292 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 C20orf96Q9NUD7 363 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
CPNE1-221ENST00000462352 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CSNK1G3Q9Y6M4 447 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
CPNE1-221ENST00000462352 KMOO15229 486 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 OR1I1O60431 355 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 GIMD1P0DJR0 217 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 ATP1B2P14415 290 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-221ENST00000462352 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-221ENST00000462352 NSG1P42857 185 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 TTPAP49638 278 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 CTBSQ01459 385 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 ILF3Q12906 894 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE1-221ENST00000462352 THOC5Q13769 683 aaKnown RBP11.63□□□□□ -0.55
CPNE1-221ENST00000462352 LRP8Q14114 963 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 PLA2G4EQ3MJ16 856 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 ZNF470Q6ECI4 717 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 MRNIPQ6NTE8 343 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 PACS1Q6VY07 963 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 SDCCAG8Q86SQ7 713 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-221ENST00000462352 KCNMB4Q86W47 210 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 NRROSQ86YC3 692 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 TRAPPC5Q8IUR0 188 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 LMNTD2Q8IXW0 634 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 GPR150Q8NGU9 434 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 GPBAR1Q8TDU6 330 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 CERS2Q96G23 380 aa11.63□□□□□ -0.55
CPNE1-221ENST00000462352 ZNF514Q96K75 400 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms