RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-205	ENST00000460485	PLXNA2	O75051	1894 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	GLYATL1P3	A0A0U1RQE8	302 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	C1orf232	A0A0U1RR37	186 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PRR23A	A6NEV1	266 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485		H0Y858	1186 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	AZIN1	O14977	448 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	UBD	O15205	165 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	BUD23	O43709	281 aa	Known RBP	13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SNX2	O60749	519 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	GPC4	O75487	556 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PRAMEF1	O95521	474 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	ANP32D	O95626	131 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	CYP2A6	P11509	494 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SRC	P12931	536 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	GNAZ	P19086	355 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	VHL	P40337	213 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PKNOX1	P55347	436 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	ZXDB	P98169	803 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SLC34A1	Q06495	639 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	GRIK2	Q13002	908 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	KPNB1	Q14974	876 aa	Known RBP	13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SPATS1	Q496A3	300 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	CTSL3P	Q5NE16	218 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	KANK2	Q63ZY3	851 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	BRAT1	Q6PJG6	821 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PAQR3	Q6TCH7	311 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	HACD2	Q6Y1H2	254 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	MACC1	Q6ZN28	852 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	TAS2R42	Q7RTR8	314 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	AHI1	Q8N157	1196 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SPATA6L	Q8N4H0	392 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PPFIBP2	Q8ND30	876 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	TSPEAR	Q8WU66	669 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	C19orf60	Q96EN9	201 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SCRN2	Q96FV2	425 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	PANX3	Q96QZ0	392 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SLC25A23	Q9BV35	468 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	IGFLR1	Q9H665	355 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	CYP4F12	Q9HCS2	524 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	LATS2	Q9NRM7	1088 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	CLEC1B	Q9P126	229 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	SLC7A8	Q9UHI5	535 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	CDH22	Q9UJ99	828 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	MED16	Q9Y2X0	877 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	NOTCH4	Q99466	2003 aa		13.97	□□□□□ -0.17
ERCC3-205	ENST00000460485	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485		A0A088AWK7	358 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	NEMP2	A6NFY4	417 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	AGAP14	A8MT82	685 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	QSOX1	O00391	747 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	NEMP1	O14524	444 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	CCL16	O15467	120 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ENTPD5	O75356	428 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PAPLN	O95428	1278 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	SPATA31D3	P0C874	917 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PABPC1	P11940	636 aa	Known RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ENO3	P13929	434 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	MTHFD2	P13995	350 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ITGAX	P20702	1163 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	DGKA	P23743	735 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ACRV1	P26436	265 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	CD70	P32970	193 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	NNMT	P40261	264 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	RECQL	P46063	649 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	MTTP	P55157	894 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	TBL3	Q12788	808 aa	Known RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	NFATC2	Q13469	925 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PTPRCAP	Q14761	206 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	OR4D1	Q15615	310 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ZNF77	Q15935	545 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	GSTA3	Q16772	222 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	MYLK3	Q32MK0	819 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	CARD16	Q5EG05	197 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ACSBG2	Q5FVE4	666 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	COQ5	Q5HYK3	327 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	RNF165	Q6ZSG1	346 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	SPATA31D4	Q6ZUB0	917 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	GPSM1	Q86YR5	675 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	MYLK4	Q86YV6	388 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PIANP	Q8IYJ0	282 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PHTF2	Q8N3S3	785 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	FBXW8	Q8N3Y1	598 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	OR56A4	Q8NGH8	313 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	RIN3	Q8TB24	985 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	AGR3	Q8TD06	166 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	ZNF483	Q8TF39	744 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	DLG3	Q92796	817 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	IRF7	Q92985	503 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	FUBP1	Q96AE4	644 aa	Known RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	PHF21B	Q96EK2	531 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	LENG8	Q96PV6	779 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	OSBPL1A	Q9BXW6	950 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	TM6SF2	Q9BZW4	377 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	MAN1C1	Q9NR34	630 aa		13.96	□□□□□ -0.17
ERCC3-205	ENST00000460485	EVL	Q9UI08	416 aa	Predicted RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms