RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ALG9Q9H6U8 611 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 ERICH4A6NGS2 130 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 CFAP99D6REC4 459 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 F8W8V4 182 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 DLX3O60479 287 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 RECQL5O94762 991 aaPredicted RBP24.15■■□□□ 1.46
U2AF1-204ENST00000459639 TGDSO95455 350 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 ATP5F1P24539 256 aaPredicted RBP24.15■■□□□ 1.46
U2AF1-204ENST00000459639 IL2P60568 153 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 PUS10Q3MIT2 529 aaKnown RBP24.15■■□□□ 1.46
U2AF1-204ENST00000459639 BTN2A2Q8WVV5 523 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 INPP5DQ92835 1189 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 PTERQ96BW5 349 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 PANX3Q96QZ0 392 aa24.15■■□□□ 1.46
U2AF1-204ENST00000459639 SARS2Q9NP81 518 aaKnown RBP24.15■■□□□ 1.46
U2AF1-204ENST00000459639 A0A1W2PQF6 199 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 TMEM114B3SHH9 223 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 TSPAN6O43657 245 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 LZTS3O60299 673 aaPredicted RBP24.14■■□□□ 1.45
U2AF1-204ENST00000459639 MMP20O60882 483 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 TSPAN12O95859 305 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 TROVE2P10155 538 aaKnown RBP eCLIP24.14■■□□□ 1.45
U2AF1-204ENST00000459639 AKT1P31749 480 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 HSF5Q4G112 596 aaPredicted RBP24.14■■□□□ 1.45
U2AF1-204ENST00000459639 LDLRAP1Q5SW96 308 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 NLRP8Q86W28 1048 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 CACUL1Q86Y37 369 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 HDDC3Q8N4P3 179 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 ANKS4BQ8N8V4 417 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 LKAAEAR1Q8TD35 194 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 FAM3CQ92520 227 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 KIAA1191Q96A73 305 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 DCUN1D1Q96GG9 259 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 LATS2Q9NRM7 1088 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 KLHL14Q9P2G3 628 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 COQ6Q9Y2Z9 468 aa24.14■■□□□ 1.45
U2AF1-204ENST00000459639 SHISA7A6NL88 538 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 SLC25A14O95258 325 aaPredicted RBP24.13■■□□□ 1.45
U2AF1-204ENST00000459639 OR56A5P0C7T3 313 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 SLC1A6P48664 564 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 DNAJB13P59910 316 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 DPTQ07507 201 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 SLC44A4Q53GD3 710 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 CPNE9Q8IYJ1 553 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 GLYATL1Q969I3 302 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 FAM131CQ96AQ9 280 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 SGF29Q96ES7 293 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 LINGO1Q96FE5 620 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 PDLIM5Q96HC4 596 aaKnown RBP24.13■■□□□ 1.45
U2AF1-204ENST00000459639 SPATS2LQ9NUQ6 558 aaKnown RBP24.13■■□□□ 1.45
U2AF1-204ENST00000459639 KCTD5Q9NXV2 234 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 KLHL42Q9P2K6 505 aa24.13■■□□□ 1.45
U2AF1-204ENST00000459639 EBAG9O00559 213 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 AP2A2O94973 939 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 ATP1B2P14415 290 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-204ENST00000459639 COL9A1P20849 921 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 TAS2R38P59533 333 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 ABCE1P61221 599 aaKnown RBP24.12■■□□□ 1.45
U2AF1-204ENST00000459639 CRY1Q16526 586 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-204ENST00000459639 DEFB123Q8N688 67 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 GATA5Q9BWX5 397 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-204ENST00000459639 MKRN2Q9H000 416 aaKnown RBP24.12■■□□□ 1.45
U2AF1-204ENST00000459639 CD248Q9HCU0 757 aa24.12■■□□□ 1.45
U2AF1-204ENST00000459639 A0A1W2PP55 124 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 LOC730098B7Z3J9 87 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 MAGEC1O60732 1142 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 KERAO60938 352 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 TRIM16O95361 564 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 C7P10643 843 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 MSH3P20585 1137 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 OVGP1Q12889 678 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 CCINQ13939 588 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 FOXR1Q6PIV2 292 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 SPATS2Q86XZ4 545 aaKnown RBP24.11■■□□□ 1.45
U2AF1-204ENST00000459639 CRLF3Q8IUI8 442 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 SLC22A9Q8IVM8 553 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 ZBTB2Q8N680 514 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 STAG3L4Q8TBR4 150 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 EEF1AKMT1Q8WVE0 214 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 ATOH8Q96SQ7 321 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 TRIM55Q9BYV6 548 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 C20orf27Q9GZN8 174 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 SERGEFQ9UGK8 458 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 SCML1Q9UN30 329 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 ARL2BPQ9Y2Y0 163 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 A8MT66 165 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 QSOX1O00391 747 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 DNTTP04053 509 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 RGS4P49798 205 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 NFKB2Q00653 900 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 OR4D1Q15615 310 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 TTLL9Q3SXZ7 439 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 EOGTQ5NDL2 527 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 NAPRTQ6XQN6 538 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 PHYKPLQ8IUZ5 450 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 NAT14Q8WUY8 206 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 NPHS2Q9NP85 383 aa24.11■■□□□ 1.45
U2AF1-204ENST00000459639 ITM2AO43736 263 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 SMIM24O75264 130 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms