RNA–Protein interactions for RNA: ENST00000456662.5

DDX39B-212, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-212ENST00000456662 UBXN4Q92575 508 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 SNX21Q969T3 373 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 C14orf79Q96F83 325 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 WDR77Q9BQA1 342 aaPredicted RBP11.66□□□□□ -0.54
DDX39B-212ENST00000456662 NOD2Q9HC29 1040 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 SIX2Q9NPC8 291 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 APEX2Q9UBZ4 518 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 PPIL1Q9Y3C6 166 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDX39B-212ENST00000456662 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
DDX39B-212ENST00000456662 OR52A4PA6NMU1 304 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 CCL21O00585 134 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 DDX3YO15523 660 aaKnown RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 GRID2O43424 1007 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 LCA5LO95447 670 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 SDC4P31431 198 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 CLCNKAP51800 687 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 TDGF1P3P51864 188 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 GSDMDP57764 484 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 TUBB4BP68371 445 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 OTUD4Q01804 1114 aaKnown RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 TUBB2AQ13885 445 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 LRRC66Q68CR7 880 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 STRADAQ7RTN6 431 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 SLFN11Q7Z7L1 901 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 ARHGAP12Q8IWW6 846 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 FAM71AQ8IYT1 594 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 AVL9Q8NBF6 648 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 DNAJB14Q8TBM8 379 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 PIH1D2Q8WWB5 315 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-212ENST00000456662 PSKH2Q96QS6 385 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 TUBB2BQ9BVA1 445 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
DDX39B-212ENST00000456662 STAB1Q9NY15 2570 aa11.65□□□□□ -0.55
DDX39B-212ENST00000456662 RTTNQ86VV8 2226 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 DOCK10Q96BY6 2186 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-212ENST00000456662 FADS2P1A8MWK0 482 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PCDH17O14917 1159 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 NUAK1O60285 661 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 IPO13O94829 963 aaKnown RBP11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PDHA1P08559 390 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 CYP11B1P15538 503 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ZNF8P17098 575 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PON1P27169 355 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PTPN9P43378 593 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 STX17P56962 302 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 FOXL2P58012 376 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 HSD11B2P80365 405 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 Q0VFX4 171 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ABRQ12979 859 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 CDC16Q13042 620 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PTCHD3Q3KNS1 767 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 FBXO38Q6PIJ6 1188 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ZNF765Q7L2R6 523 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 TM9SF4Q92544 642 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 DHTKD1Q96HY7 919 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-212ENST00000456662 GSDMAQ96QA5 445 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PDCL3Q9H2J4 239 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 OSGEPL1Q9H4B0 414 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 CATSPERBQ9H7T0 1116 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 FAM207AQ9NSI2 230 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-212ENST00000456662 PCMTD2Q9NV79 361 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 DTLQ9NZJ0 730 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ATXN10Q9UBB4 475 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
DDX39B-212ENST00000456662 ABCA4P78363 2273 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 FLNAP21333 2647 aaKnown RBP11.63□□□□□ -0.55
DDX39B-212ENST00000456662 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 FAM221AA4D161 298 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 LDB2O43679 373 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 PGLSO95336 258 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 RPL10P27635 214 aaKnown RBP11.63□□□□□ -0.55
DDX39B-212ENST00000456662 RFC1P35251 1148 aaPredicted RBP11.63□□□□□ -0.55
DDX39B-212ENST00000456662 ADORA2A-AS1P86434 159 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 SRSF11Q05519 484 aaKnown RBP11.63□□□□□ -0.55
DDX39B-212ENST00000456662 NCF4Q15080 339 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 SEPT7Q16181 437 aaKnown RBP11.63□□□□□ -0.55
DDX39B-212ENST00000456662 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 XKRXQ6PP77 449 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 IGFL2Q6UWQ7 119 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 ABRAXAS1Q6UWZ7 409 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 RAB43Q86YS6 212 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 PHYKPLQ8IUZ5 450 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 SYTL1Q8IYJ3 562 aa11.63□□□□□ -0.55
DDX39B-212ENST00000456662 TTC30BQ8N4P2 665 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms