RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CLNKQ7Z7G1 428 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 TREML1Q86YW5 311 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SLC22A15Q8IZD6 547 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SPEM1Q8N4L4 309 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 RPLP0P6Q8NHW5 317 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 RHEBL1Q8TAI7 183 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 FAM3CQ92520 227 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 STAMBPL1Q96FJ0 436 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SRPK1Q96SB4 655 aaKnown RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 STMN4Q9H169 189 aaPredicted RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 SUDS3Q9H7L9 328 aaPredicted RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 RDH14Q9HBH5 336 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SAR1AQ9NR31 198 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 INTS9Q9NV88 658 aaKnown RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 SIRT5Q9NXA8 310 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 MUTYHQ9UIF7 546 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 CHMP2BQ9UQN3 213 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 ARL2BPQ9Y2Y0 163 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 GMEB1Q9Y692 573 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SPAG17Q6Q759 2223 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 IGKV1-8A0A0C4DH67 115 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 C17orf113A0A1B0GUU1 675 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 H7C0C1 242 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 MID1O15344 667 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ITM2AO43736 263 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 NUAK1O60285 661 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 UBOX5O94941 541 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 EML2O95834 649 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 APRTP07741 180 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ITGA2BP08514 1039 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 PRPH2P23942 346 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ALDH3A1P30838 453 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ATP5OP48047 213 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CLCN5P51795 746 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 DNAJB13P59910 316 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SNRPD1P62314 119 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 GALNT1Q10472 559 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 SQSTM1Q13501 440 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 EXOSC6Q5RKV6 272 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 WASH2PQ6VEQ5 465 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 KYAT3Q6YP21 454 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 TRIM67Q6ZTA4 783 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SPATA21Q7Z572 469 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 NXPE1Q8N323 547 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
RIF1-207ENST00000454583 PDPRQ8NCN5 879 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 GCNAQ96QF7 691 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 TCF12Q99081 682 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 NELL2Q99435 816 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 RHOJQ9H4E5 214 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 STN1Q9H668 368 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 CAPN10Q9HC96 672 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SLC40A1Q9NP59 571 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 WASH6PQ9NQA3 447 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 FKBPLQ9UIM3 349 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 VPS28Q9UK41 221 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GPR34Q9UPC5 381 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 EXOC1LA0A1B0GW35 172 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GRID2O43424 1007 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SERPINF2P08697 491 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ERVK-10P10266 1014 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 C6P13671 934 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 TPH1P17752 444 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GJC1P36383 396 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 UBE2IP63279 158 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 CDH18Q13634 790 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 OR4D1Q15615 310 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SH2D4BQ5SQS7 431 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GRTP1Q5TC63 336 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SEL1L3Q68CR1 1132 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 KIAA1161Q6NSJ0 714 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 RETSATQ6NUM9 610 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 OGFOD3Q6PK18 319 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 EPGNQ6UW88 154 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 PID1Q7Z2X4 250 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SUMF1Q8NBK3 374 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 FBXO27Q8NI29 283 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GPBAR1Q8TDU6 330 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 BTN2A2Q8WVV5 523 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 KCNJ9Q92806 393 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CCDC114Q96M63 670 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ZNF285Q96NJ3 590 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 KLHL32Q96NJ5 620 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SIKE1Q9BRV8 207 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CDH19Q9H159 772 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ATP13A3Q9H7F0 1226 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 THG1LQ9NWX6 298 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 DNAJC28Q9NX36 388 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.639e-9■■■■■ 45.3
RIF1-207ENST00000454583 DEC1Q9P2X7 70 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 SLC23A2Q9UGH3 650 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ADAMTS6Q9UKP5 1117 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 WASF3Q9UPY6 502 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 HS3ST3A1Q9Y663 406 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 ERICH4A6NGS2 130 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms