RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TTC36A6NLP5 189 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 A8MXE2 369 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 KCNJ18B7U540 433 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 USP17L23D6RBM5 183 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 RRHO14718 337 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 CLGNO14967 610 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ADAMDEC1O15204 470 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 TPPPO94811 219 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 NKX2-2O95096 273 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 TGDSO95455 350 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 DDAH2O95865 285 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 HLA-DQA2P01906 255 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 IRF1P10914 325 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 EEF1DP29692 281 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 THPOP40225 353 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 BLKP51451 505 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 CLCN3P51790 818 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 STAT2P52630 851 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 HDAC4P56524 1084 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 BACE1P56817 501 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 CLDN2P57739 230 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 YWHAZP63104 245 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 CCNA1P78396 465 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 PLIN5Q00G26 463 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 IKQ13123 557 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF268Q14587 947 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ETFDHQ16134 617 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 C5orf22Q49AR2 442 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 C10orf76Q5T2E6 689 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 TMEM63BQ5T3F8 832 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 FAM171A1Q5VUB5 890 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 TMEM268Q5VZI3 342 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 JADE1Q6IE81 842 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 LRRC8EQ6NSJ5 796 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 GLDNQ6ZMI3 551 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ADGRA1Q86SQ6 560 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 AACSQ86V21 672 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 IQCA1Q86XH1 822 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 OR8H3Q8N146 312 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 MIGA1Q8NAN2 632 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 GPRC5AQ8NFJ5 357 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF398Q8TD17 642 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 RPL36ALQ969Q0 106 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 HIC2Q96JB3 615 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 BBS4Q96RK4 519 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 PAFAH2Q99487 392 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 GPATCH1Q9BRR8 931 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 IFT27Q9BW83 186 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 IFIH1Q9BYX4 1025 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 RANGRFQ9HD47 186 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ASAH2Q9NR71 780 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 SETD4Q9NVD3 440 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 ARL8BQ9NVJ2 186 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 OGFRQ9NZT2 677 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 PADI1Q9ULC6 663 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 TNNQ9UQP3 1299 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 LAMA3Q16787 3333 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 COL11A1P12107 1806 aaPredicted RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 PLXNA1Q9UIW2 1896 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 RANBP2P49792 3224 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ZNFX1Q9P2E3 1918 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 MPHOSPH10O00566 681 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 SEC14L5O43304 696 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 HS6ST1O60243 411 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 HMMRO75330 724 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CSPG5O95196 566 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 GH2P01242 217 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 TFP02787 698 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 QDPRP09417 244 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 SCG2P13521 617 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 AKR1A1P14550 325 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ITGB6P18564 788 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ITGAXP20702 1163 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CYP2B6P20813 491 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ATP5F1P24539 256 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 KLRC2P26717 231 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 HOXA7P31268 230 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CDAP32320 146 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CAMPP49913 170 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 LIG4P49917 911 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF41P51814 821 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 DYNLL1P63167 89 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PPP2R5CQ13362 524 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 OLIG2Q13516 323 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CAMK2DQ13557 499 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PFKFB3Q16875 520 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 IGSF11Q5DX21 431 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CXorf66Q5JRM2 361 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PAPD7Q5XG87 772 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 C11orf87Q6NUJ2 197 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CPLX2Q6PUV4 134 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF474Q6S9Z5 364 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 VSTM1Q6UX27 236 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 LURAP1LQ8IV03 231 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PAQR4Q8N4S7 273 aaPredicted RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 OR52N4Q8NGI2 321 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms