RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 STMN1P16949 149 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 WEE1P30291 646 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 MGAT3Q09327 533 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM83EQ2M2I3 478 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SPATS1Q496A3 300 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 IRAK1BP1Q5VVH5 260 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF534Q76KX8 674 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCTD20Q7Z5Y7 419 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SCUBE3Q8IX30 993 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCTD15Q96SI1 283 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 B3GNT5Q9BYG0 378 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF385DQ9H6B1 395 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 RUVBL2Q9Y230 463 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 COPG1Q9Y678 874 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SHOXO15266 292 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ANXA9O76027 345 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRIM16O95361 564 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 RBP1P09455 135 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 AKR1A1P14550 325 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 NOS2P35228 1153 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 RPS9P46781 194 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ARCN1P48444 511 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 LILRA4P59901 499 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 CAP1Q01518 475 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 TP53I13Q8NBR0 393 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SDCCAG3Q96C92 435 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC39A13Q96H72 371 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRMOQ9BU70 441 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 AP5M1Q9H0R1 490 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC17A6Q9P2U8 582 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 PMF1-BGLAPU3KQ54 211 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 THSD7BQ9C0I4 1608 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 BBIP1A8MTZ0 92 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 A8MV72 311 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 GABRDO14764 452 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 F9P00740 461 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 CHRNGP07510 517 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MAGEA12P43365 314 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 TM4SF4P48230 202 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 FSTL4Q6MZW2 842 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 USP51Q70EK9 711 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 R3HCC1LQ7Z5L2 792 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 CELF2-AS1Q8N7Q2 184 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 IL17RDQ8NFM7 739 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 CLEC4CQ8WTT0 213 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCTD14Q9BQ13 255 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MUC13Q9H3R2 512 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 DSN1Q9H410 356 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 DHRS12A0PJE2 317 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 UBDO15205 165 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCNJ13O60928 360 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 LCP1P13796 627 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATP5F1P24539 256 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 FPGSQ05932 587 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 LAYNQ6UX15 382 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 PAQR9Q6ZVX9 377 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 METTL2AQ96IZ6 378 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 ACSS2Q9NR19 701 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 VWA7Q9Y334 891 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 A0A0G2JMP0 313 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 A0A0X1KG70 313 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 EPN2O95208 641 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 PRLP01236 227 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 FMO4P31512 558 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 AP2S1P53680 142 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 MLLT6P55198 1093 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 CA9Q16790 459 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 GEN1Q17RS7 908 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 PROX1Q92786 737 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 COMMD8Q9NX08 183 aa13.35□□□□□ -0.27
SYNGAP1-204ENST00000449372 C16orf96A6NNT2 1141 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 MEIS3P2A8K0S8 358 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ALBP02768 609 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 GFAPP14136 432 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATP6V1B2P21281 511 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 SAT1P21673 171 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 OR2B6P58173 313 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 RPS6KA2Q15349 733 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM214AQ32MH5 1076 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ADPRMQ3LIE5 342 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms