RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 INCA1Q0VD86 236 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GALNT3Q14435 633 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TAF13Q15543 124 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NPY5RQ15761 445 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MEA1Q16626 185 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RALGPS1Q5JS13 557 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 DPY19L3Q6ZPD9 716 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RAD51AP1Q96B01 352 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HS6ST2Q96MM7 605 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RETREG1Q9H6L5 497 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PREBQ9HCU5 417 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CTNNAL1Q9UBT7 734 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SNX24Q9Y343 169 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRSS44E7EML9 344 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 DIAPH2O60879 1101 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 WDPCPO95876 746 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 P04436 131 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CNTN1Q12860 1018 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GNA13Q14344 377 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TLR1Q15399 786 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RASIP1Q5U651 963 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SYT13Q7L8C5 426 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADGRG2Q8IZP9 1017 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ARHGEF2Q92974 986 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 BTBD6Q96KE9 485 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZSCAN5AQ9BUG6 496 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACP6Q9NPH0 428 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADPRHL2Q9NX46 363 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNE2Q9Y6J6 123 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SBF2Q86WG5 1849 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TTC34A8MYJ7 566 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RAD51BO15315 384 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 DDX3YO15523 660 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GUCA1CO95843 209 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM228BP0C875 321 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CD44P16070 742 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NFKB1P19838 968 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NKX3-2P78367 333 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADAM17P78536 824 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TTMPQ5BVD1 217 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MPP7Q5T2T1 576 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CES4AQ5XG92 561 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CERS6Q6ZMG9 384 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZCCHC10Q8TBK6 192 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GUCD1Q96NT3 240 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 AMBRA1Q9C0C7 1298 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CEP44Q9C0F1 390 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ELOVL6Q9H5J4 265 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDHB10Q9UN67 800 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDHGA6Q9Y5G7 932 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 C15orf38-AP3S2A0A0A6YYH1 394 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SYCE1LA8MT33 242 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TXNDC9O14530 226 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HSPA4LO95757 839 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 IFNA2P01563 188 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HIST1H2ABP04908 130 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CPOXP36551 454 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SRYQ05066 204 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 EXOC3L2Q2M3D2 409 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 KHDC1LQ5JSQ8 128 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MSANTD2Q6P1R3 559 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 LINC00696Q6ZRV3 163 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HIST3H2AQ7L7L0 130 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PPP1R3BQ86XI6 285 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NLGN4XQ8N0W4 816 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CPXM2Q8N436 756 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RASGEF1AQ8N9B8 481 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HIST1H2ACQ93077 130 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NTAN1Q96AB6 310 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF689Q96CS4 500 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBM18Q96H35 190 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CYTH2Q99418 400 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CLMPQ9H6B4 373 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC134Q9H6E4 229 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 VRTNQ9H8Y1 702 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNK6Q9Y257 313 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 COPEO14579 308 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CAPN5O15484 640 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GRID2O43424 1007 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 UBXN7O94888 489 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MT-CYBP00156 380 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CALCAP01258 141 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC7A1P30825 629 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CARSP49589 748 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MNAT1P51948 309 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 IFT88Q13099 833 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 FIGNQ5HY92 759 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC55Q6ZSA7 311 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SYDE1Q6ZW31 735 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 B4GALNT4Q76KP1 1039 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CNEP1R1Q8N9A8 125 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 C3orf49Q96BT1 292 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ECHDC3Q96DC8 303 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RERGLQ9H628 205 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 APOBEC3GQ9HC16 384 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HRASLS2Q9NWW9 162 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 DKKL1Q9UK85 242 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms