RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CMKLR1Q99788 373 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 ACSL6Q9UKU0 697 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 PCYT1BQ9Y5K3 369 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 C5orf60A6NFR6 353 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 EFSO43281 561 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 ACP5P13686 325 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 ETV5P41161 510 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 GPR3P46089 330 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 LRP8Q14114 963 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 C16orf72Q14CZ0 275 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 TGIF1Q15583 401 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 CLPPQ16740 277 aaPredicted RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 PLA2G4EQ3MJ16 856 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 MAP9Q49MG5 647 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 ZDHHC20Q5W0Z9 365 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 CRTC3Q6UUV7 619 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 FAM151BQ6UXP7 276 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 CHST15Q7LFX5 561 aaPredicted RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 SLC13A5Q86YT5 568 aaPredicted RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 TAB3Q8N5C8 712 aaPredicted RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 USP7Q93009 1102 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 TBL1YQ9BQ87 522 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 NUDT22Q9BRQ3 303 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 CARD9Q9H257 536 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 RMI1Q9H9A7 625 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 WDR70Q9NW82 654 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 ATXN10Q9UBB4 475 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 ARL5AQ9Y689 179 aa13.84□□□□□ -0.19
TREX1-202ENST00000444177 FLNBO75369 2602 aaKnown RBP13.84□□□□□ -0.19
TREX1-202ENST00000444177 SPTA1P02549 2419 aa13.83□□□□□ -0.19
TREX1-202ENST00000444177 TRBV23OR9-2A0A075B6M9 112 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 PRAMEF33A0A0G2JMD5 474 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 GLYATL1P3A0A0U1RQE8 302 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 STX7O15400 261 aaKnown RBP13.83□□□□□ -0.2
TREX1-202ENST00000444177 GRID2O43424 1007 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 LIASO43766 372 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 NUAK1O60285 661 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 PRAMEF10O60809 474 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 MTX2O75431 263 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 METTL18O95568 372 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
TREX1-202ENST00000444177 ADRA1AP35348 466 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 MAPK10P53779 464 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 CFHR1Q03591 330 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 SQSTM1Q13501 440 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 SPARCL1Q14515 664 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 PARP6Q2NL67 630 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 P3H1Q32P28 736 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 NKAIN2Q5VXU1 208 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 ADGRG6Q86SQ4 1221 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 ZNF843Q8N446 348 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 TTC9Q92623 222 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 VPS35Q96QK1 796 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 FRMD8P1Q9BZ68 369 aaPredicted RBP13.83□□□□□ -0.2
TREX1-202ENST00000444177 TRIM39Q9HCM9 518 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 IL17CQ9P0M4 197 aa13.83□□□□□ -0.2
TREX1-202ENST00000444177 IGHV5-10-1A0A0J9YXX1 117 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 C2orf81A6NN90 581 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 GPR39O43194 453 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 CCL4P13236 92 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 SNX1Q13596 522 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 GTF2H3Q13889 308 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 PTPRCAPQ14761 206 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 CHRNA6Q15825 494 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 INSCQ1MX18 579 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 RANBP10Q6VN20 620 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 ZFAND4Q86XD8 727 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 C1orf54Q8WWF1 131 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 LRRC40Q9H9A6 602 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 IL26Q9NPH9 171 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.82□□□□□ -0.2
TREX1-202ENST00000444177 FOXJ2Q9P0K8 574 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 AKAP7Q9P0M2 348 aaPredicted RBP13.82□□□□□ -0.2
TREX1-202ENST00000444177 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 ZNF148Q9UQR1 794 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 JRKLQ9Y4A0 524 aa13.82□□□□□ -0.2
TREX1-202ENST00000444177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
TREX1-202ENST00000444177 ZNF106Q9H2Y7 1883 aaKnown RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 IGHV1OR21-1A0A087WYE8 117 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 GPR89AB7ZAQ6 455 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 C9orf172C9J069 976 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 HGSO14964 777 aaPredicted RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 VEGFDO43915 354 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 KIF5CO60282 957 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 SNX2O60749 519 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 PRAMEF1O95521 474 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 CRTAMO95727 393 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 EML2O95834 649 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 IFNB1P01574 187 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 GPR89BP0CG08 455 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms