RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 XPNPEP2O43895 674 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 NPHS1O60500 1241 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 BEST1O76090 585 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GOT1P17174 413 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 MAP2K4P45985 399 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 NDUFV1P49821 464 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GSK3BP49841 420 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 CPT1AP50416 773 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 CD47Q08722 323 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 FAM214AQ32MH5 1076 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 WSCD1Q658N2 575 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PIWIL4Q7Z3Z4 852 aaKnown RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 AFAP1L2Q8N4X5 818 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 DYNC2LI1Q8TCX1 351 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 STON2Q8WXE9 905 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 WNT8BQ93098 351 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ASPSCR1Q9BZE9 553 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 SMURF2Q9HAU4 748 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PAK1IP1Q9NWT1 392 aaPredicted RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 ABCD2Q9UBJ2 740 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 FXYD1O00168 92 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 NOBOXO60393 691 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 LRIG2O94898 1065 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ALDOCP09972 364 aaKnown RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 CASP2P42575 452 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 LILRA4P59901 499 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 DAG1Q14118 895 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ANKRD34AQ69YU3 496 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 RASAL3Q86YV0 1011 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PLD3Q8IV08 490 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GALNT12Q8IXK2 581 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 CADM2Q8N3J6 435 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 OSCP1Q8WVF1 389 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PROX1Q92786 737 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 TMBIM1Q969X1 311 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PHF21BQ96EK2 531 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GAD1Q99259 594 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 HOPXQ9BPY8 73 aaPredicted RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 BTBD2Q9BX70 525 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PIRO00625 290 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 MFSD11O43934 449 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 KPNA6O60684 536 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ALOX12P18054 663 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 PSMB9P28065 219 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 TAF6P49848 677 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ALDH3A2P51648 485 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 EMX1Q04741 257 aaPredicted RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 ZFP69Q49AA0 526 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GRAMD2AQ8IUY3 354 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 LACC1Q8IV20 430 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 CEP97Q8IW35 865 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 ZNF567Q8N184 647 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 LEMD2Q8NC56 503 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 RORBQ92753 470 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 GPR22Q99680 433 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 WDR6Q9NNW5 1121 aaKnown RBP16.66■□□□□ 0.26
PMS1-213ENST00000441310 MAU2Q9Y6X3 613 aa16.66■□□□□ 0.26
PMS1-213ENST00000441310 SOAT2O75908 522 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 NTRK1P04629 796 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 KCNA5P22460 613 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 POLD2P49005 469 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 NR2C2P49116 596 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 P2RY8Q86VZ1 359 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 ZC3HC1Q86WB0 502 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 SLC43A3Q8NBI5 491 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 PHF10Q8WUB8 498 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 KCTD15Q96SI1 283 aaPredicted RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 TTYH2Q9BSA4 534 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 C6orf62Q9GZU0 229 aaPredicted RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 SMOC2Q9H3U7 446 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 ALG2Q9H553 416 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 FBXO9Q9UK97 447 aaPredicted RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 TCRBV5S2A0A599 114 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 TBC1D4O60343 1298 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 PIGAP37287 484 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 PURAQ00577 322 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 RBM23Q86U06 439 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 TMEM135Q86UB9 458 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 SDR16C5Q8N3Y7 309 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 CCDC185Q8N715 623 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 TRPV1Q8NER1 839 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 FAR1Q8WVX9 515 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 C3orf30Q96M34 536 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 EIF2B3Q9NR50 452 aaKnown RBP16.65■□□□□ 0.26
PMS1-213ENST00000441310 SPEF1Q9Y4P9 236 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 PTGDR2Q9Y5Y4 395 aa16.65■□□□□ 0.26
PMS1-213ENST00000441310 ISPDA4D126 451 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 CENPXA8MT69 81 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 SSX4O60224 188 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 TMCC2O75069 709 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 PCMT1P22061 227 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 GPX3P22352 226 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 NMBRP28336 390 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 FMO4P31512 558 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 ADIGQ0VDE8 80 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 PPP1R8Q12972 351 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms