RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 WDR6Q9NNW5 1121 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 CNGB3Q9NQW8 809 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 AFF4Q9UHB7 1163 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 EIF2B4Q9UI10 523 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 MAGEL2Q9UJ55 1249 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 FAM155AB1AL88 458 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 CDC7O00311 574 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 BCKDKO14874 412 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 MATN3O15232 486 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 RGS5O15539 181 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 GOT2P00505 430 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 UGT2B4P06133 528 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 CNPP09543 421 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 UMPSP11172 480 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ZNF24P17028 368 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 IGFBP6P24592 240 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 CCNCP24863 283 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 NR4A2P43354 598 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ARCN1P48444 511 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 MLLT10P55197 1068 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 COPZ1P61923 177 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 OR4D1Q15615 310 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 OTUD1Q5VV17 481 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 THOC7Q6I9Y2 204 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 BLOC1S3Q6QNY0 202 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 KIAA0408Q6ZU52 694 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 DET1Q7L5Y6 550 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PROSER1Q86XN7 944 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 GATAD2AQ86YP4 633 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 LEMD2Q8NC56 503 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 MRGPRX2Q96LB1 330 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ALPK1Q96QP1 1244 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SMOQ99835 787 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SEMA3CQ99985 751 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 NACA2Q9H009 215 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TXNRD2Q9NNW7 524 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TAS2R13Q9NYV9 303 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TRMT6Q9UJA5 497 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 ZNF112Q9UJU3 913 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 CDH7Q9ULB5 785 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PCNTO95613 3336 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 RBBP6Q7Z6E9 1792 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 TYW5A2RUC4 315 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 DLGAP1O14490 977 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 PRKD3O94806 890 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 DIRAS1O95057 198 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 ALOX5P09917 674 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 RAP2AP10114 183 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 HTR1BP28222 390 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 AKT1P31749 480 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SCNN1AP37088 669 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 CD47Q08722 323 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 TRAF3Q13114 568 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 BTG3Q14201 252 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 PTPRNQ16849 979 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SULT1C3Q6IMI6 304 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 ENPP6Q6UWR7 440 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 GPRIN3Q6ZVF9 776 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 AHSA2Q719I0 299 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 CILP2Q8IUL8 1156 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SCML4Q8N228 414 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 FRS2Q8WU20 508 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 LPPQ93052 612 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 NTAN1Q96AB6 310 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 FAM120BQ96EK7 910 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 RPRD1AQ96P16 312 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 ASB2Q96Q27 587 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SLC9A7Q96T83 725 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 UHRF1Q96T88 793 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 AGO3Q9H9G7 860 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 EXOSC4Q9NPD3 245 aaKnown RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 CATSPERZQ9NTU4 200 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 GMIPQ9P107 970 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SNX8Q9Y5X2 465 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 PTPRFP10586 1907 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 J3KR12 359 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 FXYD1O00168 92 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SLC25A27O95847 323 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 CDH1P12830 882 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 S100A1P23297 94 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 POLD2P49005 469 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SLC10A7Q0GE19 358 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 MADCAM1Q13477 382 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 MAPKAPK3Q16644 382 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 FAM187BQ17R55 369 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 PYCR3Q53H96 274 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 HACD2Q6Y1H2 254 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 HORMAD1Q86X24 394 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 CIR1Q86X95 450 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 OR8H2Q8N162 312 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 OR56A4Q8NGH8 313 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 TANKQ92844 425 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 MYLPFQ96A32 169 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SMARCD1Q96GM5 515 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 CYP2S1Q96SQ9 504 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 GPR21Q99679 349 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 RERGLQ9H628 205 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms