RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TAF1P21675 1872 aa3.33□□□□□ -1.88
HMGB3P12-201ENST00000438745 KAT6BQ8WYB5 2073 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 PLSCR5A0PG75 271 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 F5H0A9 414 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 HSPA12AO43301 675 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 PAGE4O60829 102 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 GFPT2O94808 682 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF432O94892 652 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 CH25HO95992 272 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 IGKV3-20P01619 116 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 EIF2S1P05198 315 aaKnown RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 G6PDP11413 515 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 AGAP20933 346 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 CDAP32320 146 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 GABRB2P47870 512 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 EIF5P55010 431 aaKnown RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 DRAP1Q14919 205 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC39A14Q15043 492 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 C2orf68Q2NKX9 166 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF718Q3SXZ3 478 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 RGMBQ6NW40 437 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 RHBDF2Q6PJF5 856 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF771Q7L3S4 317 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 SHFQ7M4L6 423 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 MUC20Q8N307 709 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 KCNH5Q8NCM2 988 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 NR4A3Q92570 626 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 USP6NLQ92738 828 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 FAM149B1Q96BN6 582 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 OTULINQ96BN8 352 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 BICD1Q96G01 975 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ADGRG7Q96K78 797 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 TIGD1Q96MW7 591 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 MMTAG2Q9BU76 263 aaKnown RBP3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC28A3Q9HAS3 691 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ASAH2Q9NR71 780 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 TBC1D22BQ9NU19 505 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 TXLNGQ9NUQ3 528 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 HAUS2Q9NVX0 235 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 EHD2Q9NZN4 543 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 DLGAP2Q9P1A6 1054 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 ADAM18Q9Y3Q7 739 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 TTC21AQ8NDW8 1320 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 NSD2O96028 1365 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLIT3O75094 1523 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 C5P01031 1676 aa3.32□□□□□ -1.88
HMGB3P12-201ENST00000438745 LY75O60449 1722 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 C4BP0C0L5 1744 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 KIF7Q2M1P5 1343 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF541Q9H0D2 1346 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 FAM237AA0A1B0GTK4 181 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 A0A1W2PQF6 199 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 ANKRD18BA2A2Z9 1011 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 PTGES3LE9PB15 166 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 H0YIN7 160 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 TULP2O00295 520 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 PTP4A3O75365 173 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 MMP2P08253 660 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 CYC1P08574 325 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 F7P08709 466 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 LAMP2P13473 410 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 PSMA4P25789 261 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 HADHAP40939 763 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 EIF2S3P41091 472 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 PEX5P50542 639 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 CLCN3P51790 818 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 DRG2P55039 364 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 BRWD1-AS2P59051 145 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 DHX34Q14147 1143 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 NEDD9Q14511 834 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 EIF2S3LQ2VIR3 472 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 GKAP1Q5VSY0 366 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 FAM205BPQ63HN1 556 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 KLHL35Q6PF15 583 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 B3GNT6Q6ZMB0 384 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 TTC39CQ8N584 583 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 WDTC1Q8N5D0 677 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 BEST2Q8NFU1 509 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF622Q969S3 477 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 CMTM3Q96MX0 182 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF385AQ96PM9 386 aaKnown RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 C1QTNF5Q9BXJ0 243 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 C1QTNF1Q9BXJ1 281 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 NDST4Q9H3R1 872 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLCO3A1Q9UIG8 710 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 FBXO9Q9UK97 447 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 PAM16Q9Y3D7 125 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 TRIM17Q9Y577 477 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 CEPT1Q9Y6K0 416 aa3.31□□□□□ -1.88
HMGB3P12-201ENST00000438745 SBF1O95248 1867 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 KIF13BQ9NQT8 1826 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 C4AP0C0L4 1744 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 QRICH2Q9H0J4 1663 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SZT2Q5T011 3432 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 C1orf226A1L170 272 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 TMEM202A6NGA9 273 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms