RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 RPS15P62841 145 aaKnown RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 NIPAL4Q0D2K0 466 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 MMRN1Q13201 1228 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 CHRNA6Q15825 494 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 IRF2BP2Q7Z5L9 587 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 Q8NA96 180 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 THAP4Q8WY91 577 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 MR1Q95460 341 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 CXorf40BQ96DE9 158 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 C19orf60Q96EN9 201 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 ZDHHC12Q96GR4 267 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 NUP62CLQ9H1M0 184 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 PCDH18Q9HCL0 1135 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 MLXIPLQ9NP71 852 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 RBM22Q9NW64 420 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 ERRFI1Q9UJM3 462 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 DNPEPQ9ULA0 475 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 SRPK3Q9UPE1 567 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 FARSAQ9Y285 508 aaKnown RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 PCDHGA9Q9Y5G4 932 aaKnown RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 PIKFYVEQ9Y2I7 2098 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 LGALS16A8MUM7 142 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF185O15231 689 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 FTLP02792 175 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-213ENST00000436675 EBLN1P0CF75 366 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 BRAFP15056 766 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF7P17097 686 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-213ENST00000436675 SERPINB6P35237 376 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 CLCNKAP51800 687 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 QPCTQ16769 361 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ANKRD20A8PQ5CZ79 823 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF569Q5MCW4 686 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 FAM182AQ5T1J6 154 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 FAM69BQ5VUD6 431 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ADGRG6Q86SQ4 1221 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 SYVN1Q86TM6 617 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 CCHCR1Q8TD31 782 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 SYT11Q9BT88 431 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-213ENST00000436675 GPR87Q9BY21 358 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 SLC29A3Q9BZD2 475 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 TRIM39Q9HCM9 518 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 SLC40A1Q9NP59 571 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF451Q9Y4E5 1061 aa14.55□□□□□ -0.08
HDAC8-213ENST00000436675 MFSD11O43934 449 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 HLA-DQB2P05538 268 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 CCDC172P0C7W6 258 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 PIRTP0C851 137 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 ATP1A3P13637 1013 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 ARL4DP49703 201 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF165P49910 485 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 RAPSNQ13702 412 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 KRT81Q14533 505 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 NR6A1Q15406 480 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 LRRTM4Q86VH4 590 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 ARRDC2Q8TBH0 407 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 SEC14L1Q92503 715 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 NUDT9Q9BW91 350 aa14.54□□□□□ -0.08
HDAC8-213ENST00000436675 SEC16AO15027 2179 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 KMOO15229 486 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 DPM1O60762 260 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 LDLRP01130 860 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CD48P09326 243 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CA4P22748 312 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 TNFRSF8P28908 595 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 PCK1P35558 622 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 PDE1BQ01064 536 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 GALNT3Q14435 633 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CT47A1Q5JQC4 288 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-213ENST00000436675 PAPD7Q5XG87 772 aaKnown RBP14.53□□□□□ -0.08
HDAC8-213ENST00000436675 SLC6A19Q695T7 634 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CYB5D1Q6P9G0 228 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 RBMXL3Q8N7X1 1067 aaKnown RBP14.53□□□□□ -0.08
HDAC8-213ENST00000436675 GPR26Q8NDV2 337 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 FDCSPQ8NFU4 85 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 EID2BQ96D98 161 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 BTBD6Q96KE9 485 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 LYSMD1Q96S90 227 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 MAP3K3Q99759 626 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 FGF21Q9NSA1 209 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 POT1Q9NUX5 634 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 LIMA1Q9UHB6 759 aaKnown RBP14.53□□□□□ -0.08
HDAC8-213ENST00000436675 SHOC2Q9UQ13 582 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 WDR37Q9Y2I8 494 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CSMD1Q96PZ7 3565 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 CCDC88CQ9P219 2028 aa14.53□□□□□ -0.08
HDAC8-213ENST00000436675 APCP25054 2843 aa14.52□□□□□ -0.08
HDAC8-213ENST00000436675 ANKRD66B4E2M5 251 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 CHUKO15111 745 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 MATN3O15232 486 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 DDX3YO15523 660 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 IDSP22304 550 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 CES1P23141 567 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 CD86P42081 329 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 SSR1P43307 286 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 RPL26P61254 145 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 GPS2Q13227 327 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms