RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TIMM29Q9BSF4 260 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 IL22Q9GZX6 179 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
HLA-F-220ENST00000434407 BFARQ9NZS9 450 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 SLC23A2Q9UGH3 650 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 ASPMQ8IZT6 3477 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 CPED1A4D0V7 1026 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 A6NCN8 305 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 B4DGG1 531 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC188H7C350 402 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 OPA1O60313 960 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 TMEM63AO94886 807 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 ACP5P13686 325 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 PNLIPP16233 465 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 GLB1P16278 677 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 ZNF7P17097 686 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-220ENST00000434407 CASQ1P31415 396 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 B4GALNT1Q00973 533 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 INSM1Q01101 510 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-220ENST00000434407 PTK6Q13882 451 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC157Q569K6 752 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 PCID2Q5JVF3 399 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 SYT10Q6XYQ8 523 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 CAND1Q86VP6 1230 aaKnown RBP18.11■□□□□ 0.49
HLA-F-220ENST00000434407 GALNT15Q8N3T1 639 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 ZNF514Q96K75 400 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-220ENST00000434407 RUNDC3BQ96NL0 473 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 SLC2A6Q9UGQ3 507 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 KLK13Q9UKR3 277 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 MSRB2Q9Y3D2 182 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 DNMT3AQ9Y6K1 912 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-220ENST00000434407 SLC30A1Q9Y6M5 507 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 KIF26BQ2KJY2 2108 aa18.11■□□□□ 0.49
HLA-F-220ENST00000434407 SGTAO43765 313 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 NUDT21O43809 227 aaKnown RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 MLNP12872 115 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 IVDP26440 423 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 FOXN2P32314 431 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CDKN1CP49918 316 aaPredicted RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CTSCP53634 463 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 SESN2P58004 480 aaPredicted RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 SARNPP82979 210 aaKnown RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CACNG1Q06432 222 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 GTF2H3Q13889 308 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CDCP2Q5VXM1 449 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CRTC3Q6UUV7 619 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CCNI2Q6ZMN8 369 aaPredicted RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 MICALCLQ6ZW33 695 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 ZNF438Q7Z4V0 828 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 NAT8LQ8N9F0 302 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 HEXDCQ8WVB3 486 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 TTC25Q96NG3 672 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 KIFC1Q9BW19 673 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 MRM3Q9HC36 420 aaKnown RBP18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CHRAC1Q9NRG0 131 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 KLC4Q9NSK0 619 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 TREX1Q9NSU2 369 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 TBC1D29Q9UFV1 150 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 RABGEF1Q9UJ41 708 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CRLS1Q9UJA2 301 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 KCNK6Q9Y257 313 aa18.1■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC78A2IDD5 438 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC162PA2VCL2 907 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 KCNJ13O60928 360 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 EML2O95834 649 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 SPINK2P20155 84 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 MSH3P20585 1137 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 ACRV1P26436 265 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 MAGEA3P43357 314 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 DMPKQ09013 629 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 NR1D2Q14995 579 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 PPP1R7Q15435 360 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 BCL7AQ4VC05 210 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 ZRANB3Q5FWF4 1079 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 HES3Q5TGS1 186 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 IYDQ6PHW0 289 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 TMEM220Q6QAJ8 160 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 WASH2PQ6VEQ5 465 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 SYDE1Q6ZW31 735 aaPredicted RBP18.09■□□□□ 0.49
HLA-F-220ENST00000434407 TRAPPC5Q8IUR0 188 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 SFRP1Q8N474 314 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 ARL14Q8N4G2 192 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 PPHLN1Q8NEY8 458 aaKnown RBP18.09■□□□□ 0.49
HLA-F-220ENST00000434407 PATE1Q8WXA2 126 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 HDAC10Q969S8 669 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC74AQ96AQ1 378 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC97Q96F63 343 aaPredicted RBP18.09■□□□□ 0.49
HLA-F-220ENST00000434407 FAM96AQ9H5X1 160 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 WASH6PQ9NQA3 447 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 ZDHHC3Q9NYG2 299 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 RNF215Q9Y6U7 377 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 IGF2RP11717 2491 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 FREM2Q5SZK8 3169 aa18.09■□□□□ 0.49
HLA-F-220ENST00000434407 ACACAQ13085 2346 aa18.08■□□□□ 0.48
HLA-F-220ENST00000434407 NTN3O00634 580 aaPredicted RBP18.08■□□□□ 0.48
HLA-F-220ENST00000434407 PRSS56P0CW18 603 aa18.08■□□□□ 0.48
HLA-F-220ENST00000434407 MGAT1P26572 445 aa18.08■□□□□ 0.48
HLA-F-220ENST00000434407 AKT1P31749 480 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms